| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5462 |
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| Symbol | |
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| ID | 1187154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6222308 |
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| End bp | 6223228 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396782 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_795187 |
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| Protein GI | 28872568 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.278821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGCA AAATACCCAG TACAACCGCC CTGGTGAGTT TTGAGGCAGC CGCGCGCCAT
GAGAGCTTCA CCAAAGCCGC GCATGAACTT TCCCTCACGC AGGGCGCCGT TTGCCGGCAG
ATAGGCGGGC TGGAAGAGTT CCTCGGCATA GAACTGTTCC GACGCTCCAG GCGGGGCGTA
AAGCTTACAG AAGCAGGGCT TTCCTACAGC CGCCGTGTTG CCCAGCAGCT GGACGCCGTC
GAACGGGACA CCCTTTCGGT CATGGGCGAA CAAGGCGCGC ATGCCATCGA GCTGGCCGTA
GTCCCCACCT TCGGCACCCA ATGGCTATTG CCGCGTCTGA AAGACTTTCA GCACAAGCAC
CCTGATGTCA CGGTTCATCT GACCAACCGC ACGCGCCCGT TTCTGTTCGC CGACACCGAC
TTCGATGCCG CCATCTATTT TGGCGACGCC GACTGGTCCG GCACCCAGTC ACACAGGCTG
ATGGGCGAAA ACTCATTGCC GGTGTGCAGC CCTTCATTCC TGGGCGGGCG AGGCAGCCTC
AAGGCCAGCG AGCTGGCCGA GCTGCCGCTG CTTCAACAGA CCACCCGCCC CTATGCGTGG
CGCCAATGGT TCAACGCGCA GAACCTGAAC GTTGCCCGCG ACATGACCGG CCCTCGCTAC
GAGCTGTTCT CGATGCTGGC GCAGGCAGCC ATGCACGACA TGGGCGTGGC GCTGATCCCG
CCCTTTCTCA TCCTGCGTGA ACTGCACGAA AAACGCTTGG TGATCGCCAG CATCAGCGCC
CTGCCCAGCA ACAAGGCTTA TCACCTGATG ATCCCCGAGC GAAAAGTAGA ATCTGCTTCA
TTGACCGCAT TTCGCGACTG GCTGGTCAAT CAGGCCCATG ATTACTCACT GCCGCAAGAC
AAAGAACAAG CACTCGTTTG A
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| Protein sequence | MRRKIPSTTA LVSFEAAARH ESFTKAAHEL SLTQGAVCRQ IGGLEEFLGI ELFRRSRRGV
KLTEAGLSYS RRVAQQLDAV ERDTLSVMGE QGAHAIELAV VPTFGTQWLL PRLKDFQHKH
PDVTVHLTNR TRPFLFADTD FDAAIYFGDA DWSGTQSHRL MGENSLPVCS PSFLGGRGSL
KASELAELPL LQQTTRPYAW RQWFNAQNLN VARDMTGPRY ELFSMLAQAA MHDMGVALIP
PFLILRELHE KRLVIASISA LPSNKAYHLM IPERKVESAS LTAFRDWLVN QAHDYSLPQD
KEQALV
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