| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5461 |
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| Symbol | |
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| ID | 1187153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6220971 |
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| End bp | 6222152 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396781 |
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| Product | acyl-CoA dehydrogenase, putative |
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| Protein accession | NP_795186 |
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| Protein GI | 28872567 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.119164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGTG AAGCGAGCTT TAACTGGATC GACCCATTGT TGCTGGATCA ACAGCTTTCT
GAAGAAGAGC GCATGGTTCG CGACACTGCC GAGCAGTTCG CCCAGGGCAA GCTTGCGCCG
CGTGTGCTGG AAGCGTTTCG TCACGAGAAA ACCGACCCGG ACATCTTTCG CGAGATGGGT
GAAGTGGGGC TGCTGGGTGC GACCATCCCT GAAGAGTTCG GCGGCAGTGG CTTGAATTAC
GTCTGCTACG GGCTGATCGC TCGCGAAGTA GAGCGCGTTG ACTCGGGCTA TCGTTCGATG
ATGAGTGTGC AGTCCTCACT GGTCATGGTG CCGATCAATG AATTCGGCAC GCAGGCCCAG
AAAGAGAAAT ACCTGCCCAA ACTGGCGTCT GGCGAGTGGA TCGGCTGCTT TGGCCTGACC
GAGCCCAATC ACGGCTCCGA CCCTGGCGCG ATGATCACCC GGGCAAGGAG TGTCGAAGGC
GGTTATCGCC TGAGCGGCAG CAAGATGTGG ATCACCAACA GTCCGATCGC GGACGTGTTC
GTGGTGTGGG CCAAGGACGA CGCTGGAGAT ATTCGCGGTT TCGTTCTTGA AAAAGGCTGG
GCGGGGCTGA GTGCTCCGGT CATTCATGGC AAGGTCGGTT TGCGCGCGTC AATCACCGGC
GAGATCGTCA TGGACAATGT GTTCGTGCCC GAAGAAAACA TCTTCCCGGA CGTGCGCGGT
CTCAAAGGTC CTTTTACCTG CCTTAATTCG GCACGCTACG GTATTTCCTG GGGTGCGCTG
GGTGCGGCTG AATTCTGCTG GCACACCGCT CGGCAATACA CCCTTGATCG TCAGCAGTTT
GGCCGTCCGC TGGCAGCCAA TCAGTTGATC CAGAAAAAGC TCGCAGACAT GCAGACCGAG
ATCACCCTGG CGCTGCAAGG CTGTCTGCGA CTGGGGCGCA TGAAAGACGA AGGCATTGCA
GCGGTGGAAA TCACCTCGAT CATGAAGCGC AACTCCTGCG GCAAATCTCT GGATATCGCG
CGCATGGCTC GCGACATGCT GGGCGGGAAC GGGATTTCCG ACGAATTCGG CATTGCGCGC
CATCTGGTCA ATCTGGAAGT GGTGAATACG TATGAAGGGA CGCATGACGT TCATGCGTTG
ATCCTGGGGC GAGCGCAGAC CGGTATTCAG GCTTTCTATT AA
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| Protein sequence | MSGEASFNWI DPLLLDQQLS EEERMVRDTA EQFAQGKLAP RVLEAFRHEK TDPDIFREMG
EVGLLGATIP EEFGGSGLNY VCYGLIAREV ERVDSGYRSM MSVQSSLVMV PINEFGTQAQ
KEKYLPKLAS GEWIGCFGLT EPNHGSDPGA MITRARSVEG GYRLSGSKMW ITNSPIADVF
VVWAKDDAGD IRGFVLEKGW AGLSAPVIHG KVGLRASITG EIVMDNVFVP EENIFPDVRG
LKGPFTCLNS ARYGISWGAL GAAEFCWHTA RQYTLDRQQF GRPLAANQLI QKKLADMQTE
ITLALQGCLR LGRMKDEGIA AVEITSIMKR NSCGKSLDIA RMARDMLGGN GISDEFGIAR
HLVNLEVVNT YEGTHDVHAL ILGRAQTGIQ AFY
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