| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5460 |
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| Symbol | |
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| ID | 1187152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6219738 |
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| End bp | 6220958 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396780 |
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| Product | CAIB/BAIF family protein |
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| Protein accession | NP_795185 |
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| Protein GI | 28872566 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0019674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCGC TTTCACATAT AAGAGTGCTC GATCTTTCGC GTGTTCTGGC CGGACCCTGG
GCCGGGCAGA TCCTTGCTGA TCTGGGCGCT GACGTCATCA AGGTCGAGCG TCCGGGCTGT
GGCGATGACA CTCGCGCCTG GGGGCCTCCG TTTCTTAAGG ATGCGGCCGG GCATAACACC
AGTGAGGCGG CTTATTACCT GTCGGCCAAT CGTAACAAGC AGTCGGTCAC CATCGACTTC
ACGCGACCTG AAGGGCAGAA GCTGGTCAGG GAGCTGGCGG CGAAGTCCGA TATCGTCATA
GAAAACTTCA AGGTTGGTGG GTTGGCGGCG CATGGCCTGG ATTACGCGTC GCTCAAGGCA
ATCAACCCCC GACTGATCTA TTGCTCCATT ACCGGTTTCG GTCAAAGCGG TCCATATGCG
ACTCGTCCGG GTTACGACTT CATGATTCAG GCGCTTGGCG GTCTGATGAG CCTTACCGGT
TTGCCGGGGG GCGAGGAAGG TGCAGGTCCG GTGAAGGTCG GCGTCGCGCT GACCGACATT
CTGACCGGCC TGTATTCAAC GACCGCAATC CTTGCAGCTC TGGCTCATCG CGATCAAAGC
GATGTAGGGC AGCATATTGA TATGGCGTTG CTGGACGTAC AGGTGGCCTG CCTGGCCAAT
CAGGCCATGA ACTACCTGAC TACCGGGGTC GCACCAGAGC GTCTGGGCAA TGCCCATCCC
AATATCGTGC CCTATCAGAG TTTTCCGACT GCCGATGGCG ACCTTATCCT TACGGTGGGT
AACGACAGTC AGTTCAGGAA GTTTGCCGAA GTGGCGGGGC AGTCGCAGTG GGCAGATGAT
CCGCGTTTTC TGACCAACAC GCTGCGAGTT GCTCATCGTG CTGAACTGAT CCCGCTGATT
CGGCAGGTGA CGGTTTTCAA GGCGACCGCT CAGTGGGTGG CCGTACTGGA GGCTGTGGGT
GTGCCGTGCG CCCCGGTCAA TGATCTGGCC AAGGTGTTTG CCGATCCGCA AGTTGTGGCA
CGCGGGTTGG CGATTGAGCT GCCCCATGCA CTGGGTGGCA AGGTCCCGCA GGTTGCCAGC
CCGATTCGTT TGTCCGAGAC GCCGGTTGAA TACCGCAGGG CGCCGCCTAT GCTGGGCGAA
CATACAGCTG TGGTACTGGA GGAGCTTCTC GGTTTGGGCG GTGATGAGGT TGCATCGCTG
CGAGCGGCAG GTGTGCTGTA G
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| Protein sequence | MGALSHIRVL DLSRVLAGPW AGQILADLGA DVIKVERPGC GDDTRAWGPP FLKDAAGHNT
SEAAYYLSAN RNKQSVTIDF TRPEGQKLVR ELAAKSDIVI ENFKVGGLAA HGLDYASLKA
INPRLIYCSI TGFGQSGPYA TRPGYDFMIQ ALGGLMSLTG LPGGEEGAGP VKVGVALTDI
LTGLYSTTAI LAALAHRDQS DVGQHIDMAL LDVQVACLAN QAMNYLTTGV APERLGNAHP
NIVPYQSFPT ADGDLILTVG NDSQFRKFAE VAGQSQWADD PRFLTNTLRV AHRAELIPLI
RQVTVFKATA QWVAVLEAVG VPCAPVNDLA KVFADPQVVA RGLAIELPHA LGGKVPQVAS
PIRLSETPVE YRRAPPMLGE HTAVVLEELL GLGGDEVASL RAAGVL
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