Gene PSPTO_5456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5456 
Symbol 
ID1187143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6208627 
End bp6209556 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content58% 
IMG OID637396771 
Producthypothetical protein 
Protein accessionNP_795181 
Protein GI28872562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTCA TCGATGCGTG GGAAGGTCGC GCCACCATTC GCACTCGCCC GCGCCGGATT 
GTTGAGAACG ATGAAAAACT GATCTATCCG CTCAGCCGCC AGCCCTTGGT GCTCAGCGAC
ACGTTCACCC GCGAGTGCGC GCATTTGCGT GATTACGCGC TGGTGCAGAG CCTCTACAAG
TTCATCAACG ACGTGGTGAT ATTCGAAACC GAGATCGTCG ACAAGACTGC ACGCAGCATT
GCCAAGGACA ACTTCGCGAT TCGCTTTCCG TTTGCCTGCC GCTATGACGC GATGACGGTG
GTGGTCGATG AGGACTACCA CGCACTGGTG GCCATGGACT TCATGCAGCA GACCATCGCC
CTGACCGGTA TCGAACCTAT TCAGTTGCCG ACCGAGATCG AGCTCAGCCG CGCCATACCC
GCAGCGCTGG CGTTGGCCCC AGAGCACCTG CGCAGCGCCG TGGAGCTGAT TTGCGTTGCC
ATCGCGGAGA ACACCGTGAC CCATGATGTA GCAGCGTTCG CCAAGGACGA CTCGGTCAAG
CAATCGATTA AGGGCCTTAT GGCCGACCAC TTGCTGGACG AGGGGCGTCA CTCGGGATTC
TGGGCGCGAT TGGTGCGGAT TTACTGGCAC ACGGCGGCTG AGCAGGACCG TGAATGCATC
GCCCGTATTC TGCCGGTCTT CATCGCGCAA TATCTGACCA ACGATATCCA GAACGGCTTC
GACTTTACGC TGATCGAGCG CTTGCAGGTG CCGGATCCGG TCAGGCAGGC ACTCAAGGCC
GAAACCTTGG CGTTGAGCTT TCCGGTCAAT CGCCATCACC CGTTGATCGG CAACATCATG
CGCTTCTTCA AGAGCAGTTC GATGCTCGAC GATCCTTATG TACAGCGAGC GCTGGCTCAC
TACCTCCCGG TTCAGGGATC GCTGCAATGA
 
Protein sequence
MSFIDAWEGR ATIRTRPRRI VENDEKLIYP LSRQPLVLSD TFTRECAHLR DYALVQSLYK 
FINDVVIFET EIVDKTARSI AKDNFAIRFP FACRYDAMTV VVDEDYHALV AMDFMQQTIA
LTGIEPIQLP TEIELSRAIP AALALAPEHL RSAVELICVA IAENTVTHDV AAFAKDDSVK
QSIKGLMADH LLDEGRHSGF WARLVRIYWH TAAEQDRECI ARILPVFIAQ YLTNDIQNGF
DFTLIERLQV PDPVRQALKA ETLALSFPVN RHHPLIGNIM RFFKSSSMLD DPYVQRALAH
YLPVQGSLQ