Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5456 |
Symbol | |
ID | 1187143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6208627 |
End bp | 6209556 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396771 |
Product | hypothetical protein |
Protein accession | NP_795181 |
Protein GI | 28872562 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTCA TCGATGCGTG GGAAGGTCGC GCCACCATTC GCACTCGCCC GCGCCGGATT GTTGAGAACG ATGAAAAACT GATCTATCCG CTCAGCCGCC AGCCCTTGGT GCTCAGCGAC ACGTTCACCC GCGAGTGCGC GCATTTGCGT GATTACGCGC TGGTGCAGAG CCTCTACAAG TTCATCAACG ACGTGGTGAT ATTCGAAACC GAGATCGTCG ACAAGACTGC ACGCAGCATT GCCAAGGACA ACTTCGCGAT TCGCTTTCCG TTTGCCTGCC GCTATGACGC GATGACGGTG GTGGTCGATG AGGACTACCA CGCACTGGTG GCCATGGACT TCATGCAGCA GACCATCGCC CTGACCGGTA TCGAACCTAT TCAGTTGCCG ACCGAGATCG AGCTCAGCCG CGCCATACCC GCAGCGCTGG CGTTGGCCCC AGAGCACCTG CGCAGCGCCG TGGAGCTGAT TTGCGTTGCC ATCGCGGAGA ACACCGTGAC CCATGATGTA GCAGCGTTCG CCAAGGACGA CTCGGTCAAG CAATCGATTA AGGGCCTTAT GGCCGACCAC TTGCTGGACG AGGGGCGTCA CTCGGGATTC TGGGCGCGAT TGGTGCGGAT TTACTGGCAC ACGGCGGCTG AGCAGGACCG TGAATGCATC GCCCGTATTC TGCCGGTCTT CATCGCGCAA TATCTGACCA ACGATATCCA GAACGGCTTC GACTTTACGC TGATCGAGCG CTTGCAGGTG CCGGATCCGG TCAGGCAGGC ACTCAAGGCC GAAACCTTGG CGTTGAGCTT TCCGGTCAAT CGCCATCACC CGTTGATCGG CAACATCATG CGCTTCTTCA AGAGCAGTTC GATGCTCGAC GATCCTTATG TACAGCGAGC GCTGGCTCAC TACCTCCCGG TTCAGGGATC GCTGCAATGA
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Protein sequence | MSFIDAWEGR ATIRTRPRRI VENDEKLIYP LSRQPLVLSD TFTRECAHLR DYALVQSLYK FINDVVIFET EIVDKTARSI AKDNFAIRFP FACRYDAMTV VVDEDYHALV AMDFMQQTIA LTGIEPIQLP TEIELSRAIP AALALAPEHL RSAVELICVA IAENTVTHDV AAFAKDDSVK QSIKGLMADH LLDEGRHSGF WARLVRIYWH TAAEQDRECI ARILPVFIAQ YLTNDIQNGF DFTLIERLQV PDPVRQALKA ETLALSFPVN RHHPLIGNIM RFFKSSSMLD DPYVQRALAH YLPVQGSLQ
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