Gene PSPTO_5455 details

Gene Information

• Locus tag: PSPTO_5455
• ID: 1187142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 6207790
• End bp: 6208566
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637396770
• Product: hypothetical protein
• Protein accession: NP_795180
• Protein GI: 28872561

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTGTG AGAAAACTCA ACTTGAGCAC AAGAAACTCG AACTTAGCCG CCACCCGATC 
TTTGCAGAAA TCAGTTCCCT GCACGTGCTC CAGCGCTTTA TGGAAACGCA TGTCTTCGCC 
GTCTGGGACT TTATGTCGTT GACCAAGCGG CTGCAGCAGG AACTGACCTG CACCCGACTG 
CCGTGGCTGC CACCCACCGA TGCGCCTGCC GCCCGTCTGA TCAACGAAAT CGTGCTGGGG 
GAAGAGTCCG ACGACAGATT GGGGCACGGT CACTACAGCC ACTTCGAACT GTATCTGGAC 
GCCATGCGCG AAATCGGCGC AAGCACTGCG CAGATCGAGC GCTTCATCGA ACTGCAGAAA 
CAAGGCGTGC ACTACGCAAC CGCCCTGCAA CAGGTCAATG CGGGTCAGGC AGCCTCGGCA 
TTCGTGACAC ACACCCTCGA CACCGCCCTG CATGCGCCGG CGCACAGCGT TGCTGCGGCA 
TTTCTGCATG GCCGCGAGAG CGTCATCCCG CTGATGTTCC AGAGCATTCT CGATGACTGG 
GGCATCACCG TCGAACAGGC GCCGACCTTT CGCTACTACC TGGAGCGCCA TATCGAAGTG 
GACTCCGAAG ATCACGGCCC GGCAGCGGAG CAATTGCTGG CGCGGCTGGT TGCCGGTGAC 
GCGCAGCGTG AAACGGAGGT GTACCAGGCC GCCATCGCTG CCGTGGAAAG CCGGGTGCAG 
CTATGGGACA CGCTGCGCAT GAGCATGCGG GCGCCGCTGA TGCAGGCCAG TGCGTAG 

 

Protein sequence

MYCEKTQLEH KKLELSRHPI FAEISSLHVL QRFMETHVFA VWDFMSLTKR LQQELTCTRL 
PWLPPTDAPA ARLINEIVLG EESDDRLGHG HYSHFELYLD AMREIGASTA QIERFIELQK 
QGVHYATALQ QVNAGQAASA FVTHTLDTAL HAPAHSVAAA FLHGRESVIP LMFQSILDDW 
GITVEQAPTF RYYLERHIEV DSEDHGPAAE QLLARLVAGD AQRETEVYQA AIAAVESRVQ 
LWDTLRMSMR APLMQASA