Gene PSPTO_5437 details

Gene Information

• Locus tag: PSPTO_5437
• ID: 1187124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 6183842
• End bp: 6184525
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637396754
• Product: hypothetical protein
• Protein accession: NP_795164
• Protein GI: 28872545

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGTGAGC ATCTCTATCT GGTTGTGAGT GCGGCCAGTG ATGCAGAGGC GCTCAAAACC 
CTTTATCAGG TAGAACCCAG CACCCAGGTC ACCCCGATCT GGGGCGGCAC GCCGTACGAT 
ACCTGGCAGC CGGTGATGCC CTACCTGAGC GAGCTGATGC CTCGATCAGC GTTCCTGAAC 
TGGGTGGCCG AAACCGATGC CGAAGACTGG GGCTGGCTGG CCGTTTCGAC GCATCCATCG 
CAGGTAGTGT TCGAGCACCT TCGCAGCCTG ACCCAGGTAA AGATGCCGGA CGGAGCCGAG 
GTGTTTTTCC GGTTCTGGGA TGGGCGGCAT ATTTATCCGA TTCTGGAAGG GTTGGGTGAG 
GCGGCAGTGG AAGTGTTGCC GGTGTTTGAT CGCTATCTGA TCAATGGACG AGCGCTGAAA 
ACCGGGTCAG GGGCATTGCC AGTGGTGAAA GACTGGCCTT GGTGGGAGGT GCCTCAACCT 
CTTTTGGATC AGTTGACGAA AAAAGATCCA GTAACGCTGA TCGATAATTT GATGCAGTGG 
TTGACTGAAG AACGGCCGGA TATCTATGTC GCCTTTCCAG AGTCCATATT GCGCCGCAAG 
ATCGACCACT TTGTGCGCAG TACAGACGTT TCAACATCTC TCAACGAAGC ACTGCTTAAC 
CACCTGATTC TGGAGCAAGG CTGA 

 

Protein sequence

MGEHLYLVVS AASDAEALKT LYQVEPSTQV TPIWGGTPYD TWQPVMPYLS ELMPRSAFLN 
WVAETDAEDW GWLAVSTHPS QVVFEHLRSL TQVKMPDGAE VFFRFWDGRH IYPILEGLGE 
AAVEVLPVFD RYLINGRALK TGSGALPVVK DWPWWEVPQP LLDQLTKKDP VTLIDNLMQW 
LTEERPDIYV AFPESILRRK IDHFVRSTDV STSLNEALLN HLILEQG