| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5433 |
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| Symbol | |
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| ID | 1187120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6178225 |
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| End bp | 6178731 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396750 |
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| Product | hypothetical protein |
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| Protein accession | NP_795160 |
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| Protein GI | 28872541 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG AAGGCTCTGT AGCCCCCAAG GAACGCATCA ACGTCACTTT TAAACCCGCT
ACCGGCGGTA ATCAGGAAGA GATCGAGTTG CCGCTGAAGT TGTTGGCAAT CGGTGATTAC
ACCCATCGCA GGGACGAGCG CAAAGTTGAA GATCGCAAGC CGATCAGCAT CGACAAGACG
ACCTTCGACG AAGTGTTGGC CAAGCAAGAG CTTGAACTGA CACTTAGCGT GCCGAACCGC
CTTCAGGACG AAGAAGGCGT AGCGGAAGAG CTGCCCGTGA AACTGCGTGT CAACTCGATG
AAAGACTTCA ACCCGGCCAG CCTGGTTGAA CAGGTTCCCG AGCTGAAAAA ACTGATGGAA
CTGCGTGATG CGTTGGTGGC GCTCAAAGGC CCGCTGGGTA ACGCGCCTGC GTTCCGCAAA
GCTATCGAAG GCGTTCTTGC CGACGACGAA TCCCGCGGTC GCGTACTGGG TGAACTGGGC
CTGAAAGCCC CAGCCCCGGA CGCTTGA
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| Protein sequence | MAKEGSVAPK ERINVTFKPA TGGNQEEIEL PLKLLAIGDY THRRDERKVE DRKPISIDKT
TFDEVLAKQE LELTLSVPNR LQDEEGVAEE LPVKLRVNSM KDFNPASLVE QVPELKKLME
LRDALVALKG PLGNAPAFRK AIEGVLADDE SRGRVLGELG LKAPAPDA
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