| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5422 |
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| Symbol | |
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| ID | 1187109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6163605 |
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| End bp | 6164801 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396739 |
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| Product | FHA domain protein |
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| Protein accession | NP_795149 |
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| Protein GI | 28872530 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGG TTTTCGAAAT GCTGAACACC AAGCAATTCG TGCCCACTGA CTTGTGCCAA
AAGACCTTTA AACAGGCTGG CGGCGTGATT GGCAGGGGAG ACGATTGCGA CTGGATCATC
CCGGACCGCA AGCGGCACCT GTCCAATCAT CACGCGCTGA TCAGCTATCG CGACGGCTCG
TTTTTCCTGA CCGATACCAG CAGCAACGGT ATTCAGGACA GTACGAACGG CACGCGCCTG
CGCAAGGGTG AGGTGGTACG TATCGAGCAT GGCAGTGAAT ACATTCTGGG CGATTTTGAG
ATTCGTGCCC GACTGGTACG CGACCCGGCA GCTTTTGACG TAGAAGTCGG CCGCCCGCAG
GCTGCAGGCA GCATTATTCC GGACGACGCG TTTCTCGATC TCGATCCGCT GAACGCCCTT
GATCAGCAAG AGCGCGTTTA CTCGGAAATC GAAGAACTGA TCTCACCGAG TATCTCCTTG
GATGATGGCA AGCAGCGTGC TGACTATGCA CGTATCGATA TGGAAAGCCT GCTGGTGCCG
GAACTGGTCG AGGTTCCAAA AGAACCTGCG CCAGCTCCAG CGCCACCACC GGTTGAGCGT
CAGGCCGACG GCTTCTGGGA AAAGTTTGGT GCAGCGCTGG GCGTTGATCT CAAAGGGCTC
GATCACGATG CTAAAGAAGC GTTGGCTTTG AACGCAGCCC GCTTGCTCAA GCAAAGCGTC
GGCGGTTTGC AGCAGAGCCT GCGCACTCGC AGCGAACTCA AAAACGAGCT GCGTCTTGCG
CAGACCATCG TGCAAGGCAC GCAGAAAAAC CCGTTGAAGT TTGCCGTCGA TGCGGGTGAG
GCGCTGGACA TTCTGCTGCA CGCCAACAAG CCAGGGCAGT TGCCGGCCGA GCAGGCGATC
TCTCGTGCAT TCCGTGATTT GCAGGCTCAC CAGGTCGCTT TGCTGACCGC CAGCCGTGCA
GCTGTTCGAG GCACCCTTGA GCATTTCTCG CCGCAACAAC TCATGCTGCG TTTCGAGCGC
GATAACAAGC CGCTGATCGC CACTTCCGGC AGCCGCTGGA GAGCTTACGG GCGTTATCAC
CAAGCGCTGC GCCAGGATAC CGATTGGAGC GAGCGCCTTT TGACTCGGGA TTTCGCTCAG
GCCTACGAAG AGCAGATTCG TTTGATTTCC ACACTCCACA CTGACCACCA AGGATGA
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| Protein sequence | MELVFEMLNT KQFVPTDLCQ KTFKQAGGVI GRGDDCDWII PDRKRHLSNH HALISYRDGS
FFLTDTSSNG IQDSTNGTRL RKGEVVRIEH GSEYILGDFE IRARLVRDPA AFDVEVGRPQ
AAGSIIPDDA FLDLDPLNAL DQQERVYSEI EELISPSISL DDGKQRADYA RIDMESLLVP
ELVEVPKEPA PAPAPPPVER QADGFWEKFG AALGVDLKGL DHDAKEALAL NAARLLKQSV
GGLQQSLRTR SELKNELRLA QTIVQGTQKN PLKFAVDAGE ALDILLHANK PGQLPAEQAI
SRAFRDLQAH QVALLTASRA AVRGTLEHFS PQQLMLRFER DNKPLIATSG SRWRAYGRYH
QALRQDTDWS ERLLTRDFAQ AYEEQIRLIS TLHTDHQG
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