| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5421 |
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| Symbol | |
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| ID | 1187108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6163099 |
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| End bp | 6163599 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396738 |
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| Product | lipoprotein, putative |
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| Protein accession | NP_795148 |
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| Protein GI | 28872529 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGCC GCTCGACTGC TTTCTTTAAC ATGCTGGCTG CGCTCACCGC CTTGTTGGTG
CTGGCCGGCT GCTCTACGTT GTCGCCGTAC TCAAACGTCA CCAAGCTCAA CCTGAAACTG
ACCGCCAGCG ACCAGGTGAA CCCGGACCTC AACGGTCGCC CGTCCCCCGT TGTTGTGCGC
CTGTTCGAGC TCAAGCACCC GGTAGCGTTC GAAAATGCAG ATTTCTTCAG CTTGTATGAG
CGCGCAAAAG AATCTCTGGC CCCGGACATG GTTGCGTCTG AAGAGCTGGA GCTGCGTCCG
GGTGAAACCG TCGAGCTCAA GCTCAGCCTG CAAGAAGGCA GTCGTTACGT CGGCGTTCTT
GCAGCCTATC GGGACCTGCC GGACAGCAGA TGGCGCTACA CGCTGCAGGT AACACCGGTA
GGTATCACTG ACGCTGACCT GACTCTTGAT CAGAACGGCA TTCGTAACAC CCATGAACCG
CTCGCCAAGG CAGATGACTG A
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| Protein sequence | MSRRSTAFFN MLAALTALLV LAGCSTLSPY SNVTKLNLKL TASDQVNPDL NGRPSPVVVR
LFELKHPVAF ENADFFSLYE RAKESLAPDM VASEELELRP GETVELKLSL QEGSRYVGVL
AAYRDLPDSR WRYTLQVTPV GITDADLTLD QNGIRNTHEP LAKADD
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