| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5419 |
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| Symbol | |
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| ID | 1187106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6160884 |
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| End bp | 6161759 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396736 |
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| Product | hypothetical protein |
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| Protein accession | NP_795146 |
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| Protein GI | 28872527 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG ATACGAATTA CAGTCAGGAC GATAAAACCG TCCTGCTCGA CCGCCAGGGC
CACGGCCCGG CGGCGAGCCC GCTGACGGAC TTCGCTGCTC CGCCAAGGTT CGAGCAACTG
GAAGAGCGCA TGATTTACGC GGCACGCCTG CGCCCGGCCG AGGCCTTCAA CATCAGCCTC
AATGCGCTGG TCGCGGCTGG CTCCGACCTT CTTTCAGAAG TGGTACGCCT CAAGCACAGC
GACACACGTG AAGACATGTA TGCGCTCAAC GAGCATCTGA CTGCCGGGCT AAAGCTGTTT
GAAGTCCGCG CGCTGCACAA CGGTGCCGAA AGCAGCCAGG TGATGGCGGC TCGTTACGTG
CTGTGCACGG TCGTGGACGA GGCGGTTGTG ACCACGCCGT GGGGCAACGA AAGCGAGTGG
TCGCAGATGA GCTTGCTCAG CAGCTTCCAC AACGAAACAT TTGGTGGTGA GAAGTTCTTC
CAATTGCTCG ATCGGCTGTC GAAAAACCCG GTCAAGCATT TACCGATGCT GGAATTGATG
TACCTGTGTC TGTCGCTTGG CTTCGAGGGC AAGTACCGGG TGCAGGCGCG CGGCATGCTT
GAGCTTGAAG GCATCCGCGA CGCTTTGTAT CGCCAGATCC GTCAATTGCG CGGTGATGTG
CCACGTGAAT TGTCACCCCA CTGGGAAGGC TTGAACAATC GACGCCGCAG CCTGGTGCGC
ATTGTGCCTG CCTGGATGGT GGTGTTGTTT ACCCTGGTCT GTCTGGCAGT GATGTATTTC
GGCTTCGCCT GGGTACTGGG CGAGCAACGC GAAACCGTTT TACAACCATA TCAGCCGTTT
GATCCGGCGG CGGTCCAGCC GCAGTCACAG CCGTAA
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| Protein sequence | MSKDTNYSQD DKTVLLDRQG HGPAASPLTD FAAPPRFEQL EERMIYAARL RPAEAFNISL
NALVAAGSDL LSEVVRLKHS DTREDMYALN EHLTAGLKLF EVRALHNGAE SSQVMAARYV
LCTVVDEAVV TTPWGNESEW SQMSLLSSFH NETFGGEKFF QLLDRLSKNP VKHLPMLELM
YLCLSLGFEG KYRVQARGML ELEGIRDALY RQIRQLRGDV PRELSPHWEG LNNRRRSLVR
IVPAWMVVLF TLVCLAVMYF GFAWVLGEQR ETVLQPYQPF DPAAVQPQSQ P
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