| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5403 |
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| Symbol | |
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| ID | 1187090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6135556 |
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| End bp | 6136218 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396720 |
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| Product | HAD-superfamily hydrolase |
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| Protein accession | NP_795130 |
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| Protein GI | 28872511 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCCA TGCCCTGGAG CGAAATCGAT ACCGTCCTGC TGGATATGGA CGGCACGTTG
CTCGACCTGC ATTACGACGA ACACTTCTGG ATGCAACACC TGCCGCAGCG CTATGCCGAA
CTTCACGGCA TCAGTTTCGC GATGGCCTGG CTGGAATTAA AGCCGCTGTT TGAAAACAAT
GCAGGCACGC TGAACTGGTA CTGCCTGGAT TTCTGGAGCA CTGAGCTTAA ACTGTCGGTT
CGCGACCTGA AACGGGAAAT TGCGCACATG ATTGCGCTAC GCCCGGACGC AGAAACCTTT
CTGGCGGCCA TCAAGCAAGC CGGCAAGCGG GTGATCATGA TCACCAATGC GCACCGCGAC
TCGTTGTCGC TGAAGATGGA GCGCATCGAA CTGGCACCTT ATTTCGAGCG CCTGATCAGT
TCCCACGATT ATGGCTTCCC CAAGGAGAGC CAGCATTTCT GGGACGCTTT GAAAGCTGAA
ACCGCGTTTG ATCCGGCGCG CAGCCTGTTC ATCGACGACA CCCTGCCGAT CCTGCGCAGC
GCGCGCCACT TCGGCGTTGC TCACTTGTTG GCCGTCAGCC AGCCGAACAG CCAGAAAGGC
CCGAAAGACA CCGAAGAGTT TGCCGCGGTG GGCGACTACC GTGAGTTGAT CAAGGGGTTG
TGA
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| Protein sequence | MLSMPWSEID TVLLDMDGTL LDLHYDEHFW MQHLPQRYAE LHGISFAMAW LELKPLFENN
AGTLNWYCLD FWSTELKLSV RDLKREIAHM IALRPDAETF LAAIKQAGKR VIMITNAHRD
SLSLKMERIE LAPYFERLIS SHDYGFPKES QHFWDALKAE TAFDPARSLF IDDTLPILRS
ARHFGVAHLL AVSQPNSQKG PKDTEEFAAV GDYRELIKGL
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