Gene PSPTO_5402 details

Gene Information

• Locus tag: PSPTO_5402
• ID: 1187089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 6134891
• End bp: 6135457
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637396719
• Product: mutT/nudix family protein
• Protein accession: NP_795129
• Protein GI: 28872510

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCAGA AACCTACCGT ACTTGCCCGC GCAATTGTCG CCAGCAGTCG TCTGTTCCGC 
GTTGAAGAGC TGCAGTTGCG CTTTGCCAAC GGTGTCGAGC GGACCTATGA GCGTCTGGCC 
AGCCGAGGCA CGGGCCCCGG TGCCGTGATG ATTGTGGCCA TGCTCGATGC CGATCACGCG 
GTATTGATCG AAGAGTATTG CGGCGGCACC GATGCCTACG AGCTGTCCTT GCCCAAGGGC 
CTGATCGAGC CGGGCGAAGA CGTGCTTGAG GCCGCCAACC GCGAGCTCAA GGAAGAAGCC 
GGTTTCGGGG CGCACAATCT GGAATTGCTG ACCGAACTGT CACTCTCTCC CGGTTACATG 
AGCCAGAAGA TTCAGGTGGT ATTGGCCACC GACCTTTACG AGGAGCGGCT GGAGGGCGAC 
GAGCCCGAGC CGATTCGGGT TGACCGGATT AACCTGCGCG AGCTGTCGAG CCTGGCGCAG 
AATGCCCAGT TCAGCGAAGG CCGTGCACTG GCCGCGCTGT ACCTCACCCG TGACCTGCTG 
ACCCAGCGTG GACTGTTCCA GCCATGA 

 

Protein sequence

MRQKPTVLAR AIVASSRLFR VEELQLRFAN GVERTYERLA SRGTGPGAVM IVAMLDADHA 
VLIEEYCGGT DAYELSLPKG LIEPGEDVLE AANRELKEEA GFGAHNLELL TELSLSPGYM 
SQKIQVVLAT DLYEERLEGD EPEPIRVDRI NLRELSSLAQ NAQFSEGRAL AALYLTRDLL 
TQRGLFQP