Gene PSPTO_5371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5371 
Symbol 
ID1187058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6105124 
End bp6105483 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content53% 
IMG OID637396689 
ProductISPsy5, Orf1 
Protein accessionNP_795099 
Protein GI28872480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.018412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGAC CCGACGCCAA AGTCGAAAAA GTGTACCTCT ACCCCAAGCC TGTGGATTTC 
CGAAAATCTA TCGACGGCCT TGCTGCGCTG GTCGAGCTAG ATATCAAAGT CGCCGTGTTC
GACCCCGTGC TTTTTGTTTT TCTGAATCGC CCTCGTAACC TGGTGAAAAT CCTTTACTGG
GAGCGCAACG GCTTATGCCT TTGGCTCAAG CGCCTGGAGT CCGAGCGTTT CAAAACATCT
CCCGATGAGA CAGACGACGC CATCGCGCTG ACGGTTCAGG AACTGAACTG GTTGCTTGAC
GGTTTTGATC TCTGGCGCAA CCGTCCTCAT CAGGTTTTAA CTCCAAGATT CGTCGCCTGA
 
Protein sequence
MMRPDAKVEK VYLYPKPVDF RKSIDGLAAL VELDIKVAVF DPVLFVFLNR PRNLVKILYW 
ERNGLCLWLK RLESERFKTS PDETDDAIAL TVQELNWLLD GFDLWRNRPH QVLTPRFVA