Gene PSPTO_5357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5357 
Symbol 
ID1187043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6089958 
End bp6090731 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content59% 
IMG OID637396676 
Productamino acid ABC transporter, ATP-binding protein 
Protein accessionNP_795087 
Protein GI28872468 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGG CCACGCCCGC CCTGGAAATC CGTAACCTGC ACAAGCGCTA CGATCAGCTT 
GAGGTGCTCA AAGGCATCTC GCTGACCGCG CGCGATGGCG ACGTCATTTC GATCCTCGGC
TCTTCCGGCT CCGGCAAGTC CACCTTGCTG CGCTGCATCA ACCTGCTGGA AAACCCGCAT
CAGGGTCAGA TCCTGGTGGC CGGTGAAGAA CTGAAACTCA AGGCGGCGCG CAACGGCGAC
CTGATTGCCG CCGATAACCG GCAGATCAAC CGTCTGCGCA GCCAGATCGG CTTTGTATTC
CAGAACTTCA ACCTGTGGCC GCACATGAGC GTGCTCGATA ACATCATCGA AGCCCCGCGT
CGTGTTCTTG GCCAGAGCAA GGCCCAAGCC ATTGAAGTGG CCGAAGCGCT GCTGGCAAAA
GTCGGTATCG CTGACAAGCG TCACGCGTAC CCCGCCCAGC TTTCCGGTGG CCAACAGCAA
CGCGCCGCCA TTGCGCGTAC GCTGGCCATG CAGCCGAAGG TCATTCTGTT CGACGAGCCA
ACCTCGGCGC TCGACCCGGA GATGGTCCAG GAAGTACTCG GGGTCATTCG CGCCCTGGCC
GAAGAAGGCC GGACCATGCT GCTGGTGACC CACGAAATGA ATTTTGCACG TCAGGTATCA
AGTGAAGTGG TGTTTTTGCA TCAGGGAATG GTCGAAGAAC AGGGCACACC ACAGCAAGTG
TTCGAAAACC CGCTGTCGGC AAGGTGCAAA CAATTCATGT CGAGTCACCG CTAA
 
Protein sequence
MAEATPALEI RNLHKRYDQL EVLKGISLTA RDGDVISILG SSGSGKSTLL RCINLLENPH 
QGQILVAGEE LKLKAARNGD LIAADNRQIN RLRSQIGFVF QNFNLWPHMS VLDNIIEAPR
RVLGQSKAQA IEVAEALLAK VGIADKRHAY PAQLSGGQQQ RAAIARTLAM QPKVILFDEP
TSALDPEMVQ EVLGVIRALA EEGRTMLLVT HEMNFARQVS SEVVFLHQGM VEEQGTPQQV
FENPLSARCK QFMSSHR