Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5357 |
Symbol | |
ID | 1187043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6089958 |
End bp | 6090731 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637396676 |
Product | amino acid ABC transporter, ATP-binding protein |
Protein accession | NP_795087 |
Protein GI | 28872468 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGG CCACGCCCGC CCTGGAAATC CGTAACCTGC ACAAGCGCTA CGATCAGCTT GAGGTGCTCA AAGGCATCTC GCTGACCGCG CGCGATGGCG ACGTCATTTC GATCCTCGGC TCTTCCGGCT CCGGCAAGTC CACCTTGCTG CGCTGCATCA ACCTGCTGGA AAACCCGCAT CAGGGTCAGA TCCTGGTGGC CGGTGAAGAA CTGAAACTCA AGGCGGCGCG CAACGGCGAC CTGATTGCCG CCGATAACCG GCAGATCAAC CGTCTGCGCA GCCAGATCGG CTTTGTATTC CAGAACTTCA ACCTGTGGCC GCACATGAGC GTGCTCGATA ACATCATCGA AGCCCCGCGT CGTGTTCTTG GCCAGAGCAA GGCCCAAGCC ATTGAAGTGG CCGAAGCGCT GCTGGCAAAA GTCGGTATCG CTGACAAGCG TCACGCGTAC CCCGCCCAGC TTTCCGGTGG CCAACAGCAA CGCGCCGCCA TTGCGCGTAC GCTGGCCATG CAGCCGAAGG TCATTCTGTT CGACGAGCCA ACCTCGGCGC TCGACCCGGA GATGGTCCAG GAAGTACTCG GGGTCATTCG CGCCCTGGCC GAAGAAGGCC GGACCATGCT GCTGGTGACC CACGAAATGA ATTTTGCACG TCAGGTATCA AGTGAAGTGG TGTTTTTGCA TCAGGGAATG GTCGAAGAAC AGGGCACACC ACAGCAAGTG TTCGAAAACC CGCTGTCGGC AAGGTGCAAA CAATTCATGT CGAGTCACCG CTAA
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Protein sequence | MAEATPALEI RNLHKRYDQL EVLKGISLTA RDGDVISILG SSGSGKSTLL RCINLLENPH QGQILVAGEE LKLKAARNGD LIAADNRQIN RLRSQIGFVF QNFNLWPHMS VLDNIIEAPR RVLGQSKAQA IEVAEALLAK VGIADKRHAY PAQLSGGQQQ RAAIARTLAM QPKVILFDEP TSALDPEMVQ EVLGVIRALA EEGRTMLLVT HEMNFARQVS SEVVFLHQGM VEEQGTPQQV FENPLSARCK QFMSSHR
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