| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5329 |
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| Symbol | |
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| ID | 1187014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6057112 |
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| End bp | 6058449 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396648 |
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| Product | carboxyl-terminal protease family protein |
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| Protein accession | NP_795060 |
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| Protein GI | 28872441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCATT TGTCCCGCCT CACCTCGCTG GCCCTGGCAA TTGCCATCGT TATCGGCGCG
CCCCTGGCGC AAGCTGCCGA AAAAACCGCG CCAGCCACGC CTGCAGCAGT CGCACCCGCC
AAACCCAATG CCAACGCCAA GCCGCCGCTG CCGCTTGACG AGTTGCGGAC CTTTGCCGAG
GTCATGGATC GGGTCAAGGC TGCCTACGTC GAGCCGGTGG ACGACAAAAC GCTGCTGGAA
AACGCTATCA AGGGCATGCT CAGCAACCTT GATCCGCACT CGGCCTACCT CGGCCCGGAA
GATTTCCAGG AGTTGCAGGA AAGCACCAGC GGCGAATTCG GTGGTCTGGG CATCGAAGTA
GGCGTCGAAG ACGGCCTGGT CAAGGTGGTT TCGCCCATCG ACGATACCCC CGCCTCCAAG
GCTGGCATTG AGGCAGGCGA CCTGATCGTG AAGATCAATG GCACGCCGAC CCAGGGCCAG
AACATGCAGG AAGCAGTCGA CAAGATGCGC GGCAAGATCG GCGAAAAAAT AACGCTGACA
TTGGTGCGCG ATGGCGGCAC GCCGTTTGAC GTAACGCTGG CGCGGGCGAC CATTCAGGTC
AAGAGCGTCA AGGCGCAGAT GCTGGAAAAC GGCTACGGCT ACATCCGCAT CACCCAGTTC
CAGGTCAAGA CCGGCGACGA GGTCGGCAAG GCGCTGGCCA AGTTCCGCAA GGACAACGGC
AAGAAGATGA GCGGCCTGAT TCTCGACCTG CGCAACAACC CTGGCGGCGT GCTGCAATCG
GCAGTGCAGG TGGCGGACCA CTTCCTCACC AAAGGCCTGA TCGTCTACAC CAAAGGCCGC
ATCGCCAATT CCGAACTGCG CTTCTCGGCC GACCCGGCAG ACGCCAGCGA AGGCGTGCCA
CTGGTGGTGC TGATCAACGG CGGCAGCGCC TCGGCATCTG AAATTGTCGC CGGCGCCCTG
CAAGACCAGA AACGCGGCAT CCTGATGGGT ACCGATACCT TCGGCAAAGG CTCGGTGCAA
ACCGTTCTGC CGCTGAACAA CGATCGCGCA CTGAAGATCA CTACGGCGCT GTATTACACG
CCGAACGGTC GCTCTATTCA GGCGCAGGGT ATCAACCCGG ACATCGTGGT ACGTCGGGCC
AAGGTCACCA GCGAAGCGGA CGGCGAGAAC TACAAGGAAG CCGACCTGAT GGGTCACCTG
GGCAACGGCA ATGGCGGCGC CGACAAACCG ACCGTCAAAG GCAGCGCAGC GGCCAAGGCG
CGTCCGCAGG ATGACGACTT CCAGCTCAGT CAGGCGCTTA GCCTGCTGAA GGGGCTGAGT
ATCACCCGCG GTAACTGA
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| Protein sequence | MLHLSRLTSL ALAIAIVIGA PLAQAAEKTA PATPAAVAPA KPNANAKPPL PLDELRTFAE
VMDRVKAAYV EPVDDKTLLE NAIKGMLSNL DPHSAYLGPE DFQELQESTS GEFGGLGIEV
GVEDGLVKVV SPIDDTPASK AGIEAGDLIV KINGTPTQGQ NMQEAVDKMR GKIGEKITLT
LVRDGGTPFD VTLARATIQV KSVKAQMLEN GYGYIRITQF QVKTGDEVGK ALAKFRKDNG
KKMSGLILDL RNNPGGVLQS AVQVADHFLT KGLIVYTKGR IANSELRFSA DPADASEGVP
LVVLINGGSA SASEIVAGAL QDQKRGILMG TDTFGKGSVQ TVLPLNNDRA LKITTALYYT
PNGRSIQAQG INPDIVVRRA KVTSEADGEN YKEADLMGHL GNGNGGADKP TVKGSAAAKA
RPQDDDFQLS QALSLLKGLS ITRGN
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