| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5324 |
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| Symbol | secB |
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| ID | 1187009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6052712 |
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| End bp | 6053206 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396643 |
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| Product | protein-export protein SecB |
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| Protein accession | NP_795055 |
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| Protein GI | 28872436 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGATC AACCGAACAA CGGCGCTGTT GCCAACGAAG AAAACGGCCC GCAATTTTCC
CTGCAGCGTA TCTACGTTCG CGACCTGTCG TTTGAAGCGC CAAAAAGCCC GGCAATCTTC
CGCCAGGAGT GGACGCCGAC CGTCAGCCTG GACCTGAACA CTCGTCAGAA GCCGCTGGAA
GGTGATTTCT ACGAAGTCGT GCTGACCCTG TCGGTGACCG TCAACAATGG CGAAGAAGTT
GCGTTCATCG TTGAAGTGCA ACAGGCCGGT ATCTTCCTGA TCAAGGGTCT GGACGACGCC
GCAATGAGCC ACACACTGGG CGCGTTCTGC CCTAACATCC TGTTCCCGTA CGCTCGCGAA
GCCATCGACA ATCTGGTCGT ACGTGGCTCG TTCCCTGCGC TGATGCTGGC CCCGGTGAAC
TTCGACGCCC TGTACGCGCA AGAGCTGCAA CGCATGCAGG AAGCTGGCGA AACGCCAATG
CCGACTGTGC AGTAA
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| Protein sequence | MTDQPNNGAV ANEENGPQFS LQRIYVRDLS FEAPKSPAIF RQEWTPTVSL DLNTRQKPLE
GDFYEVVLTL SVTVNNGEEV AFIVEVQQAG IFLIKGLDDA AMSHTLGAFC PNILFPYARE
AIDNLVVRGS FPALMLAPVN FDALYAQELQ RMQEAGETPM PTVQ
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