Gene PSPTO_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5317 
Symbol 
ID1187002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp6045856 
End bp6046494 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID637396636 
Productantioxidant, AhpC/Tsa family 
Protein accessionNP_795048 
Protein GI28872429 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGC GACTTGGCGA CATCGCCCCT GACTTCGAGC AGGAATCCAG CGAAGGTCGT 
ATCCGTTTCC ATGAATGGCT CGGCAACAGC TGGGGTGTGT TGTTTTCTCA TCCGGCAGAC 
TTCACGCCTG TCTGCACCAC AGAGCTGGGC TTCACTGCCA AATTGAAAGA TGAGTTCGCC 
AAGCGCGGCG TTAAAGCCAT CGCGCTGTCC GTTGACCCGG TTGATTCGCA CATCAAGTGG 
ATCGACGACA TCAACACCAC GCAGAATACC CAGGTCAATT TTCCGATTCT GGCCGACGCC 
GACCGCAAGG TTTCCGACCT TTATGACTTG ATTCACCCCA ATGCCAACGA CACGCTGACC 
GTGCGCTCGC TATTCGTGAT CGACCCGAAC AAGAAAGTGC GTCTGACCAT CACCTATCCG 
GCCAGCACCG GGCGCAATTT CCACGAGATT CTGCGGGTCA TCGACTCCCT GCAACTGACC 
GACAACTATA AAGTCGCCAC GCCTGCCAAC TGGGTGGATG GTGATGATGT AGTGATCGTG 
CCGTCGATCA AGGACGAAGC CGAAATCAAA GAACGCTTTC CCAAAGGCTA CAAGGCCGTC 
ACGCCTTATC TGCGACTGAC GCCACAGCCA AACCGCTGA
 
Protein sequence
MTLRLGDIAP DFEQESSEGR IRFHEWLGNS WGVLFSHPAD FTPVCTTELG FTAKLKDEFA 
KRGVKAIALS VDPVDSHIKW IDDINTTQNT QVNFPILADA DRKVSDLYDL IHPNANDTLT 
VRSLFVIDPN KKVRLTITYP ASTGRNFHEI LRVIDSLQLT DNYKVATPAN WVDGDDVVIV 
PSIKDEAEIK ERFPKGYKAV TPYLRLTPQP NR