| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5316 |
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| Symbol | |
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| ID | 1187001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6044578 |
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| End bp | 6045543 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396635 |
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| Product | sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative |
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| Protein accession | NP_795047 |
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| Protein GI | 28872428 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACTG TCATTTTGCG TCGAAGCCTT GTCGCCCTGT TTGCTGCTGC GGTCGCTCTT
GGTGCGGTCA CTCAGGCCCA GGCGGAAGAT CTGCGCATCG GTTATCAGAA ATACGGCACG
CTGGTGCTGC TCAAGGCCAA GGGCTCGCTG GAAAAGCGCT TGGCCGAGCA GGGCGTCAAG
GTTCAGTGGA CCGAGTTCCC GGGTGGCCCG CAGTTGCTTG AAGGCCTGAA CGTCGGCTCC
ATCGATTTTG GTGTGACCGG TGAAACGCCA CCGGTCTTCG CTCAAGCAGC AGGCGCAGAT
CTTCTGTACG TCGCGTACGA GCCGCCTGCA CCAACCAGCG AAGCCATTCT GGTGCCCAAG
GACTCGCCGA TTACCTCGGT AAAAGACCTT AAAGGCAAGA AAGTCGTCCT CAATAAAGGC
TCCAACGTTC ATTACCTGTT GGTTAAGGCT CTGGAAGATG CAGGTCTCAA ATACACCGAT
ATTCAGACCG TGTTCCTGCC GCCAGCCGAT GCGCGTGCCG CTTTCGAACG TGGCAGCGTA
GACGCCTGGG TCATCTGGGA TCCTTACCAG GCCGCTGCTG AAAAGCAATT GCAGGCCCGC
ACGCTGAAAG ACGGCACTGG CATTGTCGAC AACCACCAGT TCTATCTGGC GACCAAGCCT
TACGCGCAGA AAAATCCAAA AGTGATTCAG GCCGTGATCG AAGAAGTCCG CGCGGTGGGC
GAGTGGTCCA AGGCCCACCC CGACGAAGTG ACCAAACAGG TCGCACCGCT GCTGGGGCTG
CCCGCCGACA TTACGTTGAC CTCGGTGAAA CGCCAGGGCT ACGGCGCGCT GTTCATCACC
CCGCCGGTGG TCGCCGCGCA GCAGAAAATT GCCGATACCT TCTACCAGCT CAAATTGATC
CCCAAGCCGC TCAGCATTGC TGACGTGGTC TGGACGCCAC CTGCTGCTGT TGCTCAAGCA
CAGTGA
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| Protein sequence | MRTVILRRSL VALFAAAVAL GAVTQAQAED LRIGYQKYGT LVLLKAKGSL EKRLAEQGVK
VQWTEFPGGP QLLEGLNVGS IDFGVTGETP PVFAQAAGAD LLYVAYEPPA PTSEAILVPK
DSPITSVKDL KGKKVVLNKG SNVHYLLVKA LEDAGLKYTD IQTVFLPPAD ARAAFERGSV
DAWVIWDPYQ AAAEKQLQAR TLKDGTGIVD NHQFYLATKP YAQKNPKVIQ AVIEEVRAVG
EWSKAHPDEV TKQVAPLLGL PADITLTSVK RQGYGALFIT PPVVAAQQKI ADTFYQLKLI
PKPLSIADVV WTPPAAVAQA Q
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