| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5307 |
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| Symbol | |
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| ID | 1186992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6034164 |
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| End bp | 6035261 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396626 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | NP_795038 |
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| Protein GI | 28872419 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTGGCAAGAC CCTTCTCGCG CTGTCCCTGA TGGGCGTTGT GGCCACTGCT
GCGCAGGCCG ATGACAAAGT GCTGCACGTC TATAACTGGT CCGATTACAT CGCGCCGGAC
ACCGTTGCCA AGTTCGAGAA AGAGTCGGGC ATCAAGGTGG TCTACGACGT TTTCGACAGC
AACGAGACGC TGGAAGCCAA ATTGCTCGCT GGCAAGTCCG GTTATGACAT CGTCGTACCG
TCCAACAACT TCCTCGCCAA GCAGATCAAG GCGGGCGTTT ATCAGGAGCT GGACAAGTCC
AAACTGCCGA ACTGGAAGAA CCTGAACGAA TCCTTGCTCA AGGCCGTGTC GGTCAGCGAC
CCGGACAACA AGCACGCCTT CCCTTACATG TGGGGCTCGA TCGGTATCGG CATCAACCCG
GACAAGGTCA AGGCCGCGCT GGGTGCTGAC GCGCCGGTCA ACTCGTGGGA CTTGCTGTTC
AAGCCCGAGA ACGCCGCCAA GCTGAAGTCG TGCGGCATCA GCTTCCTCGA TTCGCCAACC
GAAATGCTGC CAATCGCGCT GCATTACCTG GGCTACCCGA CCGACTCTCA GGACAAGAAG
CAGCTTGCCG AAGCCGAAGC GCTGTTCATG AAGATTCGCC CATCGATTGG TTACTTCCAC
TCGTCCAAGT ACATCTCGGA CCTGGCCAAC GGCAACATCT GTGTCGCGGT CGGTTACTCG
GGTGACATCT ATCAGGCCAA GTCGCGCGCT GCTGAGGCCG GTGGCAAGGT CAAAGTTGCT
TACAACATTC CCAAAGAAGG TGCCGGCAGC TTCTACGACA TGGTTGCCAT CCCCAAGGAT
GCCGAAAACG TTGAAGGTGC CTACAAGTTC ATGACCTTCC TGATGAAGCC GGAAATCATG
GCTGAAATCA CCAACGCCGT GCGCTTCCCG AACGGTAACG CTGCTGCTAC GGCGCTGGTC
GACAAGGAAA TCACCGGCGA TCCGGGCGTT TACCCGCCTG CTGACGTCCA GGCCAAGCTG
TATGCAATCG CCGACCTGCC TGCTGCCACG CAACGAATCA TGACCCGCAG CTGGACCAAG
ATTAAGTCAG GTAAATAA
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| Protein sequence | MKKFGKTLLA LSLMGVVATA AQADDKVLHV YNWSDYIAPD TVAKFEKESG IKVVYDVFDS
NETLEAKLLA GKSGYDIVVP SNNFLAKQIK AGVYQELDKS KLPNWKNLNE SLLKAVSVSD
PDNKHAFPYM WGSIGIGINP DKVKAALGAD APVNSWDLLF KPENAAKLKS CGISFLDSPT
EMLPIALHYL GYPTDSQDKK QLAEAEALFM KIRPSIGYFH SSKYISDLAN GNICVAVGYS
GDIYQAKSRA AEAGGKVKVA YNIPKEGAGS FYDMVAIPKD AENVEGAYKF MTFLMKPEIM
AEITNAVRFP NGNAAATALV DKEITGDPGV YPPADVQAKL YAIADLPAAT QRIMTRSWTK
IKSGK
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