| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5306 |
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| Symbol | |
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| ID | 1186991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6032868 |
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| End bp | 6033992 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396625 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | NP_795037 |
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| Protein GI | 28872418 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTATTT CTATTTTTTC CAAAGCCTTG CTGGCGGCTG CCGGCCTGAC ACTGACCCTC
AGTGCCCAGG CTGAATCCAC CGTGCATATT TATAACTGGT CCGATTACAT CGGCAAGACC
ACCCTGGCAG ACTTCAAAGC CGCTACCGGC ATCAAGCCTG TGTACGACGT GTTCGACTCC
AACGAAACCC TGGAAGCCAA GCTGCTGGCC GGGCGCACCG GCTACGACGT GGTGGTGCCG
TCCAATCACT TCCTCGGCAA GCAGATCAAG GCGGGCGCGT TCCAGAAGCT CGACAAGTCG
CTGCTGCCCA ACTACAAAAA CCTCGACCCT GCGCTGCTCA AGCGTCTGGA GAAAAACGAT
CCGGGCAACC AGTACGCTGT CCCGTACCTG TGGGGCACCA ACGGCATCGG TTATAACGTC
GACAAGGTCA AGGCGGTGCT CGGTGTCGAC AAGATCGACT CCTGGTCGGT GCTGTTCGAG
CCTGAGAACA TCAAGAAGCT GTCCAGTTGC GGAGTAGCGT TTCTTGATTC CGCCGATGAA
ATGCTGCCAG CCATGCTCAA CTACCTGGGG CTGGACCCCA ACAGTACCAA GGAAGCCGAT
TACAAGAAGG CCGAAGCCAA GCTGATGGCG ATTCGTCCTT ACGTAACCTA TTTCCACTCG
TCCAAATACA TCACCGATCT GGCCAACGGC GATATATGCG TTGCCGCAGG TTTCTCGGGC
GATGTGTTCC AGGCCAAGGC TCGTGCAGAA GAAGCGGGCA AGGGCGTGAA GCTCGCTTAC
AGCACCCCGA AAGAGGGCGG CAACTTGTGG TTCGACATGC TGGCGATTCC GGCGGACTCG
AAAAACGTCA AAGCCGCCAG CGCCTTCATC AACTACATGC TTGACCCCAA AGTCATTGCC
CAGGTCAGCG ATGAAGTCGG CTATGCCAAC CCCAATCCCG CCTCCGGCGA GTTCATGGAA
CAGAAAATTC GTACTGACGC AGCGGTCTAC CCGTCTCAGG AAGTGCTGGA CCGTCTGTTC
GTGAACAGCG AGTTGCCACC CAAGGTGCAA CGTCTCATGA CCCGCAGCTG GACCAAAGTA
TCCGATCCAC GAACCCCACA TTTCAAGCCA CTGGCTGACG CCTGA
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| Protein sequence | MSISIFSKAL LAAAGLTLTL SAQAESTVHI YNWSDYIGKT TLADFKAATG IKPVYDVFDS
NETLEAKLLA GRTGYDVVVP SNHFLGKQIK AGAFQKLDKS LLPNYKNLDP ALLKRLEKND
PGNQYAVPYL WGTNGIGYNV DKVKAVLGVD KIDSWSVLFE PENIKKLSSC GVAFLDSADE
MLPAMLNYLG LDPNSTKEAD YKKAEAKLMA IRPYVTYFHS SKYITDLANG DICVAAGFSG
DVFQAKARAE EAGKGVKLAY STPKEGGNLW FDMLAIPADS KNVKAASAFI NYMLDPKVIA
QVSDEVGYAN PNPASGEFME QKIRTDAAVY PSQEVLDRLF VNSELPPKVQ RLMTRSWTKV
SDPRTPHFKP LADA
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