Gene PSPTO_5305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5305 
Symbol 
ID1186990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6032473 
End bp6032832 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content48% 
IMG OID637396624 
ProductISPsy5, Orf1 
Protein accessionNP_795036 
Protein GI28872417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGAC CCGACGCCAA AGTCGAGAAA GTCTACCTCT ATCCCAAACC CGTGGATTTC 
AGAAAATCCA TCGATGGCTT AGCTGCTTTG GTCGAGTTGG ATATTAAAGT GGCGGTCTTT
GATCCGGTGC TCTTTGTCTT TCTCAACAAA TCCCGGAATC GAGTGAAGAT TTTGTATTGG
GAGCGTAACG GCTTCTGCCT TTGGCTCAAG CGTCTCGAGT CCGAGCGTTT CAAAATCTCG
CCAGATGATG TCGACGAAGC CATTGTGCTG ACGGTTCAGG AATTGAATTG GCTGCTGGAT
GGATTTGATC TGTGGCGCAA CCGTCCTCAT AAGATTTTGA CTCCAAGGTT TGTTGCCTGA
 
Protein sequence
MMRPDAKVEK VYLYPKPVDF RKSIDGLAAL VELDIKVAVF DPVLFVFLNK SRNRVKILYW 
ERNGFCLWLK RLESERFKIS PDDVDEAIVL TVQELNWLLD GFDLWRNRPH KILTPRFVA