Gene PSPTO_5303 details

Gene Information

• Locus tag: PSPTO_5303
• Symbol: potG
• ID: 1186988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 6029633
• End bp: 6030775
• Gene Length: 1143 bp
• Protein Length: 380 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637396622
• Product: putrescine ABC transporter, ATP-binding protein
• Protein accession: NP_795034
• Protein GI: 28872415
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components
• TIGRFAM ID: [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGTTG CCTCCGGCGC CTACAAGAAA GCCCTCGAAG GCGGTCAGCA ACCCAAAGAG 
GTGCTGGTCA GGATCGATAG GGTCACCAAG AAGTTCGACG AGACGATTGC GGTGGACGAT 
GTGTCCCTGC AGATCAACAA GGGCGAAATC TTCGCCCTGC TTGGCGGCTC TGGCTCCGGC 
AAGTCCACGC TGCTGCGCAT GCTGGCCGGT TTCGAGCGCC CGACCGAGGG GCGTATCTAC 
CTCGACGGCG TCGACATCAC CGACATGCCG CCGTACGAAC GTCCGATCAA CATGATGTTT 
CAGTCCTATG CGCTGTTCCC GCACATGACC GTGGCCGACA ACATCGCCTT CGGCCTCAAG 
CAGGACAAGC TCGCCAAGTC GGAAATCGAA GCCCGTGTGG CCGAAATGCT CAAGCTGGTG 
CAGATGACCC AGTACGCCAA GCGCAAGCCG CATCAGCTTT CCGGCGGCCA GCGTCAGCGT 
GTTGCGCTGG CCCGTTCGCT GGCCAAAAAG CCCAAGCTGC TGCTGCTCGA TGAACCGATG 
GGCGCGCTGG ACAAGAAACT GCGCTCGCAG ATGCAACTGG AGCTGGTGGA GATCATCGAG 
CGCGTTGGCG TGACCTGCGT GATGGTGACT CACGATCAGG AAGAGGCCAT GACCATGGCC 
GAGCGCATCG CCATCATGCA TCTGGGCTGG ATCGCGCAGA TCGGCAGCCC TATCGACATC 
TACGAAACCC CTACCAGCCG TCTGGTCTGC GAGTTCATCG GCAGCGTCAA CCTGTTCGAG 
GGTGAAGTGA TCGAGGACAT GGAAGGCCAT GCGCTGATCC GCAGCCCGGA GCTGGAACGC 
AACATTTATG TCGGCCACGG CGTCAGTACG TCGGTGGAAG ACAAGCACAT CACCTACGCA 
TTGCGCCCGG AAAAACTGCT GATCACCGCT GAACAACCCG GTTTCGAATA CAACTGGTCG 
CGCGGCAAGG TCCACGACAT TGCCTACCTG GGCGGCCATT CGGTGTTCTA CGTCGAACTG 
CCGGGCGGCA AGCTGGTGCA GTCGTTTGTC GCCAATGCCG AGCGTCAGGG CGCGCGACCT 
ACCTGGGGCG ATGAAGTCTA CGTCTGGTGG GAAGACGACA GCGGCGTGGT ACTGCGCTCA 
TGA 

 

Protein sequence

MAVASGAYKK ALEGGQQPKE VLVRIDRVTK KFDETIAVDD VSLQINKGEI FALLGGSGSG 
KSTLLRMLAG FERPTEGRIY LDGVDITDMP PYERPINMMF QSYALFPHMT VADNIAFGLK 
QDKLAKSEIE ARVAEMLKLV QMTQYAKRKP HQLSGGQRQR VALARSLAKK PKLLLLDEPM 
GALDKKLRSQ MQLELVEIIE RVGVTCVMVT HDQEEAMTMA ERIAIMHLGW IAQIGSPIDI 
YETPTSRLVC EFIGSVNLFE GEVIEDMEGH ALIRSPELER NIYVGHGVST SVEDKHITYA 
LRPEKLLITA EQPGFEYNWS RGKVHDIAYL GGHSVFYVEL PGGKLVQSFV ANAERQGARP 
TWGDEVYVWW EDDSGVVLRS