| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5301 |
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| Symbol | potI |
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| ID | 1186986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6027838 |
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| End bp | 6028719 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396620 |
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| Product | putrescine ABC transporter, permease protein |
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| Protein accession | NP_795032 |
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| Protein GI | 28872413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCT TTCGATTCTC GAACCTGATG CTGGTTTTCG GCCTGTTGTT CATCTACGCG
CCGATGGTGA TTCTGGTCAT CTACTCGTTC AACGCCTCGC AACTGGTGAC GGTCTGGGGC
GGTTGGTCGG TGAAATGGTA CGTCGGCCTG CTGGACAACT CGCAACTGAT GGGCTCGGTG
ATGCGCTCAC TGGAAATCGC CTGCTACACC GCTATTGCGG CAGTGGCATT GGGCACCATG
GCCGCGTTCG TCCTGACCCG CATCAGCCGC TTCAAGGGCC GGACGTTCTT CGGCGGGCTG
GTCACGGCGC CGCTGGTGAT GCCGGAAGTA ATCACCGGTC TGTCGCTGTT GCTGCTGTTC
GTGGCCATGG CGCAGATGAT CGGCTGGCCG CAGGAACGCG GCATCATGAC CATCTGGATC
GCCCACACGA CGTTCTGCGC GGCTTACGTG GCGGTTGTGG TGTCGGCGCG GCTGCGTGAG
CTGGACCTGT CGATCGAAGA GGCGGCAATG GACCTGGGCG CGCGCCCGTG GAAGGTGTTC
TTCCTGATCA CCATCCCGAT GATCGCGCCG TCACTGGCTG CCGGGGGCAT GATGTCGTTT
GCGCTGTCGC TGGACGACCT GGTACTCGCC AGCTTCGTTT CCGGGCCGGG CTCGACGACC
TTGCCGATGG AGGTGTTCTC TGCTGTGCGC TTGGGCGTGA AGCCTGAAAT CAACGCCGTT
GCGAGTCTGA TCCTGCTGGC CGTGTCACTG GCGACCTTCC TTGTCTGGTT CTTCACCCGC
CGCGCTGAAA ACAACCGCAA ACGCGCGATC CAGCAAGCCA TCGAGGAAAG CGCTGCCGAC
GCCTGGACGC AGCCTGACCC AAGGCGAGCG CCAGCTGTCT GA
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| Protein sequence | MNRFRFSNLM LVFGLLFIYA PMVILVIYSF NASQLVTVWG GWSVKWYVGL LDNSQLMGSV
MRSLEIACYT AIAAVALGTM AAFVLTRISR FKGRTFFGGL VTAPLVMPEV ITGLSLLLLF
VAMAQMIGWP QERGIMTIWI AHTTFCAAYV AVVVSARLRE LDLSIEEAAM DLGARPWKVF
FLITIPMIAP SLAAGGMMSF ALSLDDLVLA SFVSGPGSTT LPMEVFSAVR LGVKPEINAV
ASLILLAVSL ATFLVWFFTR RAENNRKRAI QQAIEESAAD AWTQPDPRRA PAV
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