Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5300 |
Symbol | |
ID | 1186985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6025145 |
End bp | 6027532 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396619 |
Product | penicillin amidase family protein |
Protein accession | NP_795031 |
Protein GI | 28872412 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCA GCCTTGTCAT TCTAGCCATT ATTATTGCCA TCATCGCCGG CGGCGCAGGC TGGTACGTGA ACAGCAAGCA GCCGGTCCGC GATGGCGAGA TCGCCATGAG CCGTCTTCAA GCGCCCGTCA CCCTGCGTTA CGACGAGCGC GGCGTACCGC ACATACGGGC TGAAAACGAA GCCGATCTGT ACCGTGCGCT GGGTTACGCC CATGCCCAGG ACCGGCTGTT CCAGATGGAA ATGCTGCGTC GTCTGGCGCG TGGCGAGCTG GCCGAAATAC TCGGGCCGAA TCTGCTCGAG ACCGACAAAC TGTTTCGCAC CCTGCGCATC CGCGAGCATG CTGACGCATA CGTCGCACAC CAGGACAAGA CCACTGCGAC CTGGAAAGCG CTGGAAGCCT ACATCGACGG CATCAATCAG TATCAGGACA CCCACGCAAG GCCGATGGAG TTTGACGTGC TGGGCATCCC CAGGCGGCGC TTCACTGCCG AAGACACGCT CAGCATCGGC GGCTATCTGG CCTACAGTTT TGCCGCCGCG TTCCGCACCG AGCCACTGCT GACCTACGTG CGCGACCAGC TTGGCCCGCA GTATTTGAAA GTGTTCGATC TGGACTGGCA CCCGGACGGT ATGCTGGACG CAAAACCGGC ACTGGCCAGC GCCGACTGGA AAGGCCTGGC TGAACTGGCA CAGTTGAGCC ACAAGGCGCT GGAAGACGCA GGCCTGCCGC AATTCGAGGG CAGCAACGCC TGGGCGATTT CCGGCAGCCG CACGCAAAGC GGTAAACCTA TTCTTGCGGG CGATCCGCAC ATTCGCTTCT CGGTGCCCTC GGTATGGTAC GAGGCGCAGC TGTCTGCGCC AGGCTTTGAG CTGTACGGTC ACTTTCCGGC GCTCAACCCG TTCGCGTTTC TGGGCCACAA CATGGATTTC GGCTGGAGCC TGACCATGTT TCAGAACGAT GACGTTGACC TGATTGCCGA AAAGACCAAC CCCGACAACC CCAATCAGGT CTGGTATCAC GGCCAATGGG TGGACATGAA GCGTACCGAG CAGCAGATCG CGGTCAAAGG TCAGGCCCCG GTCACGCTGA CCCTGATTGA GTCGCCGCAC GGCCCTATCG TCAATAACGT GATGGGCAAG AATGCCGGTC AGACGCCGAT TGCAATGTGG TGGTCATTTC TGGTGTCCGC CAACCCCGTG CTTGATGGTT TCTACGATGC CAATCGCGCC GACACGCTGG ACAAGATGCG CAGCGCCGCC GAGAAGATCC AGTCGCCGGG CCTTAATATC GTCTGGGCCA ACGCCAAGGG CGACATTGGC TGGTGGGCAG CGGCGCAACT GCCGATCCGC CCGGAAGGCG TCAACCCGGG TTTCATTCTG GATGGCAGCA CCGCGCAGGC CGATAAACTG GGTTTCTACC CGTTCAGCGC CAACCCGCAC GAAGAAAACC CTGCGCGTGG CTACATCGTG TCAGCCAACT TCCAGCCACT GTCGCCGACC GGCATGCAGA TTCCGGGGTA TTACAACCCG GCTGAGCGCG GCCAGGAACT CAACCGGCAA CTGAGTGATT CCAGCATCAA GTGGGACCTG GCGGCCAGCA AGGCCTTGCA GTTGAGCACA CAGACCGATT ACGCCCCGAG CATTCTCAGG CCTCTGATTC CGGTGCTGCG CAGCGCGATC AGCGACCCGG ACGAACTCGC GCTGGTCGAG CGGCTGGCCA GCTGGAAAGG TGATTACCCG GTTGATTCGG TGGGTGCCAC GCTGTTCAAC CAGTTCCTCT TCGACCTGAC TGAAGAGACT TTCCACGACG AACTGGACGA TGCGCTGTTT GAAACCTTGC TGTCGACCCG CGCACTGGAC TCCGCCTTGC CACGCCTGGC CGCCGATGCC GATTCGCCCT GGTGGAACAA TCGCAATTCG CCCCACGAAG AAAGCCGCGC CAACACCGTC AAGGTGGCCT GGCGGGCCAG CGTTTCGCAC TTGCGATCGC TGTACGGCAC CAATCCGGAC GAATGGCTCT GGGGCAAGGC TCACACTTTG ACCCAAGGTC ATCCGCTGGG ATCACAGAAG CCGCTGGACA GTATTTTCAA CGTCGGCCCG TATGCTGCGC CGGGCACTCA CGAAGTACCG AACAACCTGT CCTCCAGCAT CCGCCCTGCC CCGTGGCCCG TCGGCTACGG CCCCTCGACC CGCCGCCTCA TAGACTTCGC CGACCCGGCC CACAGCCTGG GCATCAACCC GGTAGGCCAG AGCGGTGTAC CGTTCGACAA GCACTATTCG GATCAGGCCA AGGCGTTTGT GAACGGCGAG TACGTGCCGC AGCGCTTTAG TGAGGAAGAT GTGGCAGCGC ATACCGAAGG CGTTTTGCGG TTGGTGCCGG GGGAGTAG
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Protein sequence | MKRSLVILAI IIAIIAGGAG WYVNSKQPVR DGEIAMSRLQ APVTLRYDER GVPHIRAENE ADLYRALGYA HAQDRLFQME MLRRLARGEL AEILGPNLLE TDKLFRTLRI REHADAYVAH QDKTTATWKA LEAYIDGINQ YQDTHARPME FDVLGIPRRR FTAEDTLSIG GYLAYSFAAA FRTEPLLTYV RDQLGPQYLK VFDLDWHPDG MLDAKPALAS ADWKGLAELA QLSHKALEDA GLPQFEGSNA WAISGSRTQS GKPILAGDPH IRFSVPSVWY EAQLSAPGFE LYGHFPALNP FAFLGHNMDF GWSLTMFQND DVDLIAEKTN PDNPNQVWYH GQWVDMKRTE QQIAVKGQAP VTLTLIESPH GPIVNNVMGK NAGQTPIAMW WSFLVSANPV LDGFYDANRA DTLDKMRSAA EKIQSPGLNI VWANAKGDIG WWAAAQLPIR PEGVNPGFIL DGSTAQADKL GFYPFSANPH EENPARGYIV SANFQPLSPT GMQIPGYYNP AERGQELNRQ LSDSSIKWDL AASKALQLST QTDYAPSILR PLIPVLRSAI SDPDELALVE RLASWKGDYP VDSVGATLFN QFLFDLTEET FHDELDDALF ETLLSTRALD SALPRLAADA DSPWWNNRNS PHEESRANTV KVAWRASVSH LRSLYGTNPD EWLWGKAHTL TQGHPLGSQK PLDSIFNVGP YAAPGTHEVP NNLSSSIRPA PWPVGYGPST RRLIDFADPA HSLGINPVGQ SGVPFDKHYS DQAKAFVNGE YVPQRFSEED VAAHTEGVLR LVPGE
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