| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5284 |
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| Symbol | ptsP |
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| ID | 1186969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6009168 |
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| End bp | 6011447 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396603 |
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| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
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| Protein accession | NP_795015 |
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| Protein GI | 28872396 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATA CGCTGCGCAA GATCGTCCAG GAAGTTAACT CCGCCAAGGA TCTCAAGGCG
GCGTTGGGCA TTATTGTGTT GCGCGTCAAG GAGGCCATGG GCAGCCAGGT CTGCTCGGTC
TACCTGCTCG ATGCCGAAGT GAACCGTTTT GTGCTGATGG CCTCCGAAGG CCTCAACAAG
CGTTCCATCG GCAAAGTCAG CATGGCGCCG AACGAAGGCC TTGTTGGTCT GGTCGGTACG
CGCGAAGAAC CTCTAAACCT CGAAAACGCC GCTGATCACC CCCGTTATCG CTACTTCGCC
GAGACCGGTG AAGAGCGTTA TGCCTCGTTC CTGGGGGCGC CGATCATCCA CCATCGTCGT
GTGGTTGGCG TATTGGTGAT CCAGCAAAAG GAGCGCCGTC AGTTCGACGA GGGCGAGGAA
GCCTTCCTTG TCACCATGAG TGCGCAACTG GCGGGCGTTA TCGCGCATGC CGAAGCCACC
GGCTCGATTC GCGGTCTGGG TCGCCAGGGC AAGGGCATTC AGGAAGCCAA GTTTGTCGGT
GTGGCCGGCT CGCCGGGTGC CGCAGTCGGT GTCGCAGTGG TCATGCTGCC GCCTGCCGAT
CTGGAAGTTG TCCCGGACAA GACCGTCACG GATATCGCTG CCGAGCTGAC GCTGTTCCAG
AATGCACTGG AAGGTGTGCG CAACGACATG CGCACCCTGT CCGCCAAGCT CGCCACGCAA
CTGCGCCCCG AAGAGCGCGC GCTGTTCGAT GTCTACCTGA TGATGCTCGA CGATGCTTCG
CTGGGCAGCG AGGTGACCAA TGTCATCAAG ACCGGCGAAT GGGCACAAGG TGCCTTGCGC
TCGGTGGTCA GCGAGCACGT CAAACGCTTT GAGCTGATGG ACGATGCTTA CCTGCGTGAG
CGGGCCTCGG ACGTCAAGGA CCTGGGCCGC CGCCTGCTGG CGTACCTGCA GGAAGAGCGG
CAACAGGCAC TGGTTTACCC CGATAACACG ATTCTGGTCA GTGAAGAGCT GACCCCGGCC
ATGCTTGGCG AAGTGCCGGA AGGCAAGCTG GTCGGTCTGG TGTCGGTGCA AGGTTCCGGC
AACTCCCACG TCGCGATTCT GGCGCGGGCG ATGGGTATTC CCACGGTCAT GGGCCTGGTG
GATTTCCCGT ACTCCAAGGT CGATGGCATC GATCTTGTGG TCGACGGCTA TCACGGCGAA
GTCTTCACCA ACCCCAGCGA AATCATGCGT AAGCAGTTCG GCAAGGTGGT GGAGGAGGAG
CGTCAGCTCT CTCAGGGCCT GGATGCCCTG CGCGAATTGC CGTGCGTGAC CCTCGACGGG
CATCGCATGC CGCTGTGGGT CAACACCGGT CTGCTAGCCG ACGTCGCTCG CGCCCAGCAG
CGTGGCGCCG AAGGGGTTGG CCTGTATCGC ACCGAAGTGC CGTTCATGAT CAACCAGCGT
TTCCCGAGTG AAAAGGAACA GCTGGCGATC TACCGCGAGC AACTGGCGGC CTTCCATCCG
CTGCCGGTGA CCATGCGCAG CCTGGACATC GGCGGCGACA AGTCGCTGTC CTACTTCCCG
ATCAAGGAAG ACAACCCGTT TCTCGGCTGG CGCGGTATTC GCGTCACCCT CGACCACCCG
GAAATCTTTC TGGTTCAGAC CCGCGCCATG CTCAAGGCCA GCGAAGGCCT GAACAACCTG
CGCATTCTGT TGCCGATGAT TTCCAGCACC CATGAAGTGG AAGAGGCGCT GCACCTGATC
CACCGGGCCT GGGGCGAAGT GCGCGACGAA GGCACCGATG TGCCGATGCC GCCTGTCGGC
GTGATGATCG AAGTACCCGC TGCGGTTTAC CAGACTCGTG ACCTGGCGCG GCAGGTGGAC
TTCCTCTCGG TGGGCTCCAA CGACCTGACC CAATACCTGC TGGCGGTCGA CCGCAACAAC
CCGCGTGTGG CCGATCTCTA CGATTACCTG CACCCGGCGG TGCTTCAGGC GCTGCAAAGC
GTGGTGCGTG ATGCCCACGC CGAGGGCAAG CCGGTGAGCA TCTGCGGCGA AATGGCCGGC
GACCCGGCAG CCGCCGTGCT GCTCATGGCG ATGGGCTTCG ACAGCCTGTC GATGAACGCC
ACCAACCTGC CGAAAGTGAA GTGGATGCTG CGCCAGATCA ACCTCAGCAA GGCCAAGGAG
TTGCTGGCGC AACTGATGAC CAACGACAAC CCGCAAGTCA TCAGCAGCTC CCTGCAACTG
GCACTGAAAA ACCTCGGTCT GTCGCGGATG ATCAACCCGG GCTCGGTCAA AGGGCACTAG
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| Protein sequence | MLNTLRKIVQ EVNSAKDLKA ALGIIVLRVK EAMGSQVCSV YLLDAEVNRF VLMASEGLNK
RSIGKVSMAP NEGLVGLVGT REEPLNLENA ADHPRYRYFA ETGEERYASF LGAPIIHHRR
VVGVLVIQQK ERRQFDEGEE AFLVTMSAQL AGVIAHAEAT GSIRGLGRQG KGIQEAKFVG
VAGSPGAAVG VAVVMLPPAD LEVVPDKTVT DIAAELTLFQ NALEGVRNDM RTLSAKLATQ
LRPEERALFD VYLMMLDDAS LGSEVTNVIK TGEWAQGALR SVVSEHVKRF ELMDDAYLRE
RASDVKDLGR RLLAYLQEER QQALVYPDNT ILVSEELTPA MLGEVPEGKL VGLVSVQGSG
NSHVAILARA MGIPTVMGLV DFPYSKVDGI DLVVDGYHGE VFTNPSEIMR KQFGKVVEEE
RQLSQGLDAL RELPCVTLDG HRMPLWVNTG LLADVARAQQ RGAEGVGLYR TEVPFMINQR
FPSEKEQLAI YREQLAAFHP LPVTMRSLDI GGDKSLSYFP IKEDNPFLGW RGIRVTLDHP
EIFLVQTRAM LKASEGLNNL RILLPMISST HEVEEALHLI HRAWGEVRDE GTDVPMPPVG
VMIEVPAAVY QTRDLARQVD FLSVGSNDLT QYLLAVDRNN PRVADLYDYL HPAVLQALQS
VVRDAHAEGK PVSICGEMAG DPAAAVLLMA MGFDSLSMNA TNLPKVKWML RQINLSKAKE
LLAQLMTNDN PQVISSSLQL ALKNLGLSRM INPGSVKGH
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