Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5273 |
Symbol | |
ID | 1186958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5995891 |
End bp | 5996721 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396592 |
Product | histidine ABC transporter, ATP-binding protein, putative |
Protein accession | NP_795004 |
Protein GI | 28872385 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCG TGGAACCGAA CAAAATCGTC GTCAAAAACG TGTTCAAGAT TTTTGGCAAC CGCTCGAAGG AAGCGCTGGC GCTGATCAAA CAGAACCAGA GCAAGGATCA GGTACTGGCG CAGACCGGCT GCGTGGTGGG GGTCAACGAC CTGTCGCTGT CGATCGGCAG TGGCGAGATT TTCGTCATCA TGGGCCTGTC CGGCTCCGGC AAATCGACGC TGGTGCGCCA CTTCAACCGG CTGATAGACC CGACCAGCGG CGAGATTCTG GTCGATGGCG AAGACATCCT GCGCTACGAC ATGGAGGCCT TGCGCCAATT TCGTCGGCAC AAGATCAGCA TGGTGTTTCA GAGCTTCGGC CTGCTGCCGC ACAAGACTGT GCTGGCCAAC GTCGCGTACG GCCTGAAAGT GCGCGGCGAG AGCAAGGCGC TGTGCCAGGA ACGCGCGCAG CACTGGGTCA CGACGGTGGG CCTGAAGGGC TACGAAAACA AATACCCGCA CCAGCTTTCC GGTGGCATGC GCCAGCGCGT CGGCCTGGCA CGGGCATTGG CGGCGGACAC CGACATCATC CTGATGGACG AAGCCTTCAG CGCCCTCGAC CCGTTGATCC GCGCCGAGAT GCAGGACCAG TTGCTGGAAC TGCAAGCCAG CCTGCACAAG ACCATCGTGT TCATCACCCA CGACCTGGAC GAAGCGGTAC GCATCGGCAA TCGCATCGCA ATCCTCAAGG ACGGGCGATT GATTCAGGTC GGTACGCCGA AAGAAATTCT TCACTCGCCC GCCGACGATT ACGTGGACCG TTTCGTTCAG CGCCGCGTGG CCACCCTTTA A
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Protein sequence | MSSVEPNKIV VKNVFKIFGN RSKEALALIK QNQSKDQVLA QTGCVVGVND LSLSIGSGEI FVIMGLSGSG KSTLVRHFNR LIDPTSGEIL VDGEDILRYD MEALRQFRRH KISMVFQSFG LLPHKTVLAN VAYGLKVRGE SKALCQERAQ HWVTTVGLKG YENKYPHQLS GGMRQRVGLA RALAADTDII LMDEAFSALD PLIRAEMQDQ LLELQASLHK TIVFITHDLD EAVRIGNRIA ILKDGRLIQV GTPKEILHSP ADDYVDRFVQ RRVATL
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