Gene PSPTO_5264 details

Gene Information

• Locus tag: PSPTO_5264
• ID: 1186949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5985584
• End bp: 5986300
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637396583
• Product: lipoprotein, putative
• Protein accession: NP_794995
• Protein GI: 28872376

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCGT TCGCCCCACG CTATCTGCTG CTTGTCGCAT TTTCCATCCT GTTGGGTGCC 
TGTCAGAGCG CGCCTACCGT AGAAACGCCT GCCTCGCAGG TTCAGCCCGA TGCCTTTGCG 
CAGCTTGAAC AGAACATCGC CAGCAACGAG CTGGCGACGG CCGAGGATCA ACTCGCAACG 
TTACAGGCCG CCAATGCTGG CGACATCCGC CTGGAGCCCT TTCAGCGACG TCTGGCAGAG 
GCCTACCTGA GCCGTAGCCA GATAAGCCTG CAGAAGGGCG ACATGAATGC GGCGGCCAGC 
GCATTGTCGC GTGCGCGCGC ACTGATGCCC AAAGCGCCAG CGCTGACCAG CGGGGTCAAC 
GGTGCCATCG CTCATGCACG CAAGGCGGAG CTTGAAAAAG CCGAAGCGGA CCTCAAAGCT 
GCTGAAGACA AAAGGGTGGC CAAACTGGTT GATCCGTCGG CAGAAAGCAC GACCATCGAG 
CTGAAAATCG GCGATATGCG CGCATTGCGT CACCAACTGG ACGATATTGC AGCGGATACC 
GTGGCGTTCA ATTGTGACGT GCTGTTGGTG GTGCCGCGCA CCGAAGATTA TCCGTGGCTG 
GCCACATTGC TGACCAAACG GGTGGTCAAG GCCAATCCGG ATTTTGAATT GCAACTGCGT 
CGGGAAATCG AGCGCAATGA AAAAGCGCAC ATCGTTTTGA CGCCAGCCAG GTCCTGA 

 

Protein sequence

MKPFAPRYLL LVAFSILLGA CQSAPTVETP ASQVQPDAFA QLEQNIASNE LATAEDQLAT 
LQAANAGDIR LEPFQRRLAE AYLSRSQISL QKGDMNAAAS ALSRARALMP KAPALTSGVN 
GAIAHARKAE LEKAEADLKA AEDKRVAKLV DPSAESTTIE LKIGDMRALR HQLDDIAADT 
VAFNCDVLLV VPRTEDYPWL ATLLTKRVVK ANPDFELQLR REIERNEKAH IVLTPARS