| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5263 |
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| Symbol | katE |
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| ID | 1186948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5983233 |
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| End bp | 5985383 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396582 |
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| Product | catalase |
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| Protein accession | NP_794994 |
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| Protein GI | 28872375 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGCA AGAAAGCACC ACCTGCGACC GATACGTCAA AAAGCCAGAT GGCCGGCACT
GATACACCGG ACCGCGGCAA CACCAACGCC AAGCTGGAGA GCCTCGAGCA ATTTCGCTCG
GACGCCACCG GCCAGGCGCT GCGCACCAAC CACGGCGTAA AAATCTCTGA TAACCAGAAC
ACCCTTAAAG TCGGCAGCCG TGGCCCTTCG CTGCTTGAAG ACTTCATCAT GCGTGAAAAA
ATCACGCACT TTGACCATGA GCGTATCCCG GAACGTATTG TTCACGCCCG CGGCACCGCA
GCCCATGGCT ATTTCCAGAC GTATGAAAAC CACGGCGCAC TCAGCAAGGC GGGTTTTTTG
CGTGATCCGG CCGAGAAAAC GCCGGTTTTC GTGCGTTTCT CGACTGTTCA GGGGCCACGT
GGCTCGGGCG ATACCGTGCG CGATGTGCGT GGTTTTGCGG TCAAGTTCTA CACCGGCGAA
GGCAACTTCG ACCTGGTGGG CAACAACATG CCGATCTTCT TTATTCAGGA CGCGATCAAG
TTTCCCGACT TCGTGCACGC GGTAAAACCT GAACCGCACA ACGAAATCCC GACTGGCGGC
TCGGCGCACG ACACCTTCTG GGACTTCGTC TCGCTGGTGC CGGAATCTGC ACACATGGTG
CTGTGGACCA TGTCCGACCG CGCGATCCCG AAAAGCCTGC GCACCATGCA GGGCTTTGGT
ATCCACACCT TCCGCCTGAT CAACACCGAA GGTAAATCCA GCTTCGTCAA ATTCCACTGG
AAGCCCAAGT TCGGCGTGTG CTCGCTGGTC TGGGACGAGG CGCAGAAGCT GGCCGGCAAG
GACACTGATT TCCACCGCCG CGACCTGTGG GAGTCCATCG AGATGGGCGA CTACCCGGAA
TGGGAACTGG GCGTGCAGAT CGTTGCCGAG GAAGACGAGC ACAAGTTCGA CTTCGACCTG
CTCGATCCGA CCAAGATCAT CCCGGAAGAA CTGGTGCCGG TCACTCCGCT GGGCAAAATG
GTGCTGAACC GTAACCCGGA CAACTACTTT GCCGAGACCG AGCAGGTTGC CTTCTGCCCG
GGCCACATCG TGCCAGGCAT CGACTTCTCC AATGATCCGC TGCTGCAAGG TCGCCTGTTC
TCTTACACCG ACACGCAGAT CAGCCGTCTT GGTGGCCCAA ACTTCCACGA GATCCCGATC
AACCGTCCGA TTGCGCCGAA CAACAACGGT CAGCGCGATG CTCAGCACCG CACCACCATC
GACAAGGGCC GCGCTTCCTA CGAGCCGAAC TCGATTGATG GCGGCTGGCC GAAAGAAACC
CCTGCTGCTG CAGTGGACGG CGGCTTCGAG ACTTACCCTG AGCGCGTCGA AGCGCACAAG
GTGCGTGAGC GCAGCGAATC GTTCGGCGAC CACTTCTCGC AGGCTACCCT GTTCTTCCAG
AGCATGAGCC ACCACGAGAA AGAGCACATC ATCGCGGCGT ACAGCTTCGA GTTGGGCAAG
GTCGAGCGCG AGTACATTCG TGCCCGTCAG GTCAACGAGA TTCTGGCCAA CATTGATCTT
GAGCTGGCCA GCCGTGTGGC TGCCAACCTT GGCTTGCCTG CGCCGACTGC TGGAACCGTG
CCTGTTCGTA ACACCTCGGT AAAAGAGTCG CCGGCGCTGA GCCAGGTCAA TCTGCTGTCG
GGTGACATTG TTTCGCGCAA AGTCGCCATC CTTGTCGCCA ATGGCGTGGA CGGCAAAGCG
GTCGAGGCCA TGAAGAAGGA ACTGACTGCA AAGGGCGCAC ATGCCAAGGT TCTCGGCCCG
ACGTCTGCAC CCGTCAAAAC TGCTGATGGC GCCAGCCTGC CGGTAGATGC TTCTGCTGAA
GGCTTGCCTT CGGTAGCGTT CGACGCGGTG TTTGTGCCGG GCGGCAAGGA CTCGGTGAAG
GCGTTGAGCA CCGATGGCGT GGCGCTGCAC TTTATCCTGG AAGCCTACAA GCACCTCAAG
GCCATCTCCG TTGCCGGGGA AGCCAAAGAA CTGCTGACGT TGCTACGCCT GGAAGAAGAT
GCAGGCTTGC TGGTTGTGTC CGATAGCAAA TCGTTCGAGA CGTTCTTCAA CGCGATTGCG
CAACACCGCG TCTGGGACCG AGAAGTGAAG GCCAAAGCTG TTCCGGCTTG A
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| Protein sequence | MASKKAPPAT DTSKSQMAGT DTPDRGNTNA KLESLEQFRS DATGQALRTN HGVKISDNQN
TLKVGSRGPS LLEDFIMREK ITHFDHERIP ERIVHARGTA AHGYFQTYEN HGALSKAGFL
RDPAEKTPVF VRFSTVQGPR GSGDTVRDVR GFAVKFYTGE GNFDLVGNNM PIFFIQDAIK
FPDFVHAVKP EPHNEIPTGG SAHDTFWDFV SLVPESAHMV LWTMSDRAIP KSLRTMQGFG
IHTFRLINTE GKSSFVKFHW KPKFGVCSLV WDEAQKLAGK DTDFHRRDLW ESIEMGDYPE
WELGVQIVAE EDEHKFDFDL LDPTKIIPEE LVPVTPLGKM VLNRNPDNYF AETEQVAFCP
GHIVPGIDFS NDPLLQGRLF SYTDTQISRL GGPNFHEIPI NRPIAPNNNG QRDAQHRTTI
DKGRASYEPN SIDGGWPKET PAAAVDGGFE TYPERVEAHK VRERSESFGD HFSQATLFFQ
SMSHHEKEHI IAAYSFELGK VEREYIRARQ VNEILANIDL ELASRVAANL GLPAPTAGTV
PVRNTSVKES PALSQVNLLS GDIVSRKVAI LVANGVDGKA VEAMKKELTA KGAHAKVLGP
TSAPVKTADG ASLPVDASAE GLPSVAFDAV FVPGGKDSVK ALSTDGVALH FILEAYKHLK
AISVAGEAKE LLTLLRLEED AGLLVVSDSK SFETFFNAIA QHRVWDREVK AKAVPA
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