| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5259 |
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| Symbol | |
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| ID | 1186944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5979646 |
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| End bp | 5980278 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396578 |
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| Product | Sco1/SenC family protein |
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| Protein accession | NP_794990 |
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| Protein GI | 28872371 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCA CCCAGAAAAC CGTTTTTATC GTCGCCGCCA TTGTGGCCCT CGTTCTTGGC
CTGGTCCTCA GCCGCCTGCT GCCTGGTAGC GGGCCGAGCA ATCAGACTGC GCTTAATGAG
GCAGGTATTG TCCTGCTGCC GAAAAGCCGT CAGTTGCCAG CGCTGAGCAT GATCGACCAG
AACGGTGCGG CAGTGGCCCT TGATGGCCTG AAAGACCAGT GGACGCTGAT GTTCTTCGGC
TACACGTTTT GCCCAGACAT CTGCCCGACG ACGCTGGCGC AGATAAAGCA GATTCGCAGT
GAATTACCCA CAGCAGCGGT CGAGCGAATG CGCGTGGTGC TGGTCAGCGT TGACCCCAAC
CGCGATACCC CGCAGCAACT CAAGGAATAC CTGAGCTATT TCGACCCCCA GTACATCGGC
CTGACCGCGC CGGTGGCCGA CATCCAGAAA CTGGCCAACA GCGTGAGCAT CCCGTTCATA
CCCGCCGATA CCAGCAAGCC GAATTACTTT GTCGACCACA GCGGCAACCT GGCCCTGATC
GGCCCGGACG GCACCCAACG AGGCTTCATC CGCGCCCCGC TGAATAACCA GAAACTGGTG
AAGCAATTAC CAAGGTTGCT GGAAAGGGAT TAA
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| Protein sequence | MTRTQKTVFI VAAIVALVLG LVLSRLLPGS GPSNQTALNE AGIVLLPKSR QLPALSMIDQ
NGAAVALDGL KDQWTLMFFG YTFCPDICPT TLAQIKQIRS ELPTAAVERM RVVLVSVDPN
RDTPQQLKEY LSYFDPQYIG LTAPVADIQK LANSVSIPFI PADTSKPNYF VDHSGNLALI
GPDGTQRGFI RAPLNNQKLV KQLPRLLERD
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