Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5256 |
Symbol | |
ID | 1186941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5976499 |
End bp | 5978031 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396575 |
Product | sulfate transporter family protein |
Protein accession | NP_794987 |
Protein GI | 28872368 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTATTA GAGAATTGAA ATCTGCTTTA CCGCGTGAGC TGCTGGCTTC CGTGGTCGTG TTCCTGGTTG CACTGCCGCT GTGCATGGGG ATCGCGATTG CATCCGGCAT GCCTCCGGCC AAAGGCCTGA TCACCGGCAT CGTTGGTGGC CTGGTGGTCG GCTGGATAGC CGGTTCGCCA CTGCAGGTCA GTGGTCCGGC TGCGGGTCTG GCGGTATTGG TCTTCGAAGT GGTGCGCGAG CATGGCATGG CGATGCTCGG GCCGATCCTG CTGCTGGCAG GCTTGCTTCA GTTGCTGGCG GGTCGATTCA AGCTTGGCTG CTGGTTCCGG GTCACCGCAC CTGCGGTGGT TTACGGCATG CTCGCCGGCA TCGGCGTGCT GATCGTCCTG TCACAGGCGC ACGTCATGTT CGACAGCGGG CCTAAACCTT CCGGGCTGGA TAACCTGATC GGCTTCCCCG CCACATTGGT TCAGGCCATC GGGCCAGGCA CCGGCATGCA AGCCGGTATG CTCGGTCTGG GCACCATGCT GATCATGTGG GGCTGGGAGA AACTCCGCCC ACAATCCTTG CGCTTCGTGC CCGGCGCGCT GCTGGGTGTT GGTATTGCAA CCGGTATCAG CCTGTTCATG GCCTTGCAGG TCAAGCGCGT TGAAGTGCCC GATAACCTGG CCGACGCCAT CGACTGGCTG CGCCCTGCGG ACCTGATGAA CCTGGCTGAC CCGGCGATTC TGGTTGCCGC CATTGTCGTC GCCTTCATTG CCAGTGCCGA AACGCTGCTT TCTGCATCGG CGGTGGACCG CATGCACAGT GGCGAACGTT CGGACTTCGA CAAGGAACTG AGCGCTCAAG GCGTGGGTAA TATGCTCTGC GGACTGCTGG GTGCGTTGCC GATGACTGGC GTAATCGTGC GCAGCTCGGC CAACGTGCAG GCCGGTGCCA AGACTCGTTA CTCGACCATA CTCCACGGTA CGTGGCTGCT GGCGTTCGTC TTGCTGCTGT CGAGCGTATT GCAAAGCATA CCGGTCGCAA GCCTTGCAGG CGTATTGGTC TACACCGGTC TGAAACTGGT CGATCTGAAA GCGTTTCGCG GTCTGGGCCG CTATGGCCGG ATGCCGATGT TCACCTATGC GGCAACCGCC GTCGCGATCG TCTTTACCGA CCTGTTGACA GGTGTGCTGA TCGGTTTCGG CCTGACGCTG GTCAAACTGG CCTTCAAGGC ATCGCGTCTG AAGATCAATG TGGTACCGCT GGCGGGCGAA AAAGAGTGTG AGCTGCGTCT GGTGGGCGCT GCGACCTTCC TCAAGGTGCC GGCGCTGACT CAGGCATTGG CCACTATCCC GCAAGGCAGC ACCGTGCATG TGCCACTGGG CAACCTGTCT TACATTGATC ACTCGTGCCT GGAACTGCTG GAAGAGTGGG GCCGCTCCAA CGCCGCTAAC GGAACCCGGC TGCTCATCGA GCCGCGTGGC TTGAAGCGTC GTCTTGAAGG GCGGGTCTAC ACGACCACAG GGATTGGTTC GGGCGCAACC TGA
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Protein sequence | MGIRELKSAL PRELLASVVV FLVALPLCMG IAIASGMPPA KGLITGIVGG LVVGWIAGSP LQVSGPAAGL AVLVFEVVRE HGMAMLGPIL LLAGLLQLLA GRFKLGCWFR VTAPAVVYGM LAGIGVLIVL SQAHVMFDSG PKPSGLDNLI GFPATLVQAI GPGTGMQAGM LGLGTMLIMW GWEKLRPQSL RFVPGALLGV GIATGISLFM ALQVKRVEVP DNLADAIDWL RPADLMNLAD PAILVAAIVV AFIASAETLL SASAVDRMHS GERSDFDKEL SAQGVGNMLC GLLGALPMTG VIVRSSANVQ AGAKTRYSTI LHGTWLLAFV LLLSSVLQSI PVASLAGVLV YTGLKLVDLK AFRGLGRYGR MPMFTYAATA VAIVFTDLLT GVLIGFGLTL VKLAFKASRL KINVVPLAGE KECELRLVGA ATFLKVPALT QALATIPQGS TVHVPLGNLS YIDHSCLELL EEWGRSNAAN GTRLLIEPRG LKRRLEGRVY TTTGIGSGAT
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