| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5254 |
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| Symbol | |
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| ID | 1186939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5974390 |
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| End bp | 5975448 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396573 |
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| Product | radical SAM domain protein |
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| Protein accession | NP_794985 |
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| Protein GI | 28872366 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCC CTGCCCCGGT TCGTGGTCGC GGTACCGCCA GCAATCCGCA TAATCGTTTC
GCGCCCAGCC AGTCTGTGGC CGAAGACGAC GGCTGGTATC AGGAAGTCCC GCTGACGCAG
GGCACCACCG TCACGCTGGA AACCGCCAAA AGCATCATCA CCCGCAACAC CTCGCCGGAC
ATTCCGTTCG ACCGGTCGAT CAATCCTTAT CGGGGCTGTG AACATGGCTG CATCTATTGC
TTCGCCAGAC CCAGCCACGC CTATTGGGAC ATGTCTCCAG GGCTCGATTT CGAGACCAGA
CTGATCGCCA AAACCAACGC GGCGACATTG CTGGAGCAAC AGCTCTCCAA GCCAGGCTAC
CGCTGCGCGC CTATCACCCT GGGAGCCAAT ACCGACCCGT ATCAGCCTAT CGAACGTGAA
CACCGCATCA CTCGCGCTAC GCTTGAGGTA TTGCTGCGCT ATCGTCATCC GGTGAGCATC
ATTACCAAAG GCTCACTGAT CCTGCGGGAT CTGGATCTGT TGGCAGAAAT GGCCAGATTG
CGCCTGGTAT CGGTATTCAT CAGCCTGACG ACGCTGGATG ACGAACTCAA ATGCATTCTC
GAGCCCAGGG CCGCAGCGCC CAAGGCCCGT TTGCGGGCCA TTCGGGTATT GCGTCAGGCG
GGCGTGCCGG TCGGTGTGCT GTGCGCGCCA ATGATCCCGA TGATCAACGA CCACGAACTG
GAAGCGCTAT TGAGCGAGGC AAAGGACGCG GGTGCATTGA GCGCCAGTTA CGTGATGCTG
CGCTTGCCGC TGGAAGTCGC ACCGCTGTTC GACGAATGGT TGAAAACGCA TTACCCGCAG
CGCGCCGAAC ATGTGATGAG CCTTGTTCGC CAAAGTCGCG GCGGCGCACT GTACGACAGT
CGTTTTGGCT CGAGGATGCG TGGCGAAGGA CCTTTTGCCG ATCTGCTGGC GCAACGCTAT
GCCTTGGCAA TCAAGCGGCT TGGATTGAAC AAACGTGATG GCTTCACACT CGATTGTGAT
GCGTTTTGTC CGCCCGGACA ACAAATGTCA CTCTTGTAA
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| Protein sequence | MSSPAPVRGR GTASNPHNRF APSQSVAEDD GWYQEVPLTQ GTTVTLETAK SIITRNTSPD
IPFDRSINPY RGCEHGCIYC FARPSHAYWD MSPGLDFETR LIAKTNAATL LEQQLSKPGY
RCAPITLGAN TDPYQPIERE HRITRATLEV LLRYRHPVSI ITKGSLILRD LDLLAEMARL
RLVSVFISLT TLDDELKCIL EPRAAAPKAR LRAIRVLRQA GVPVGVLCAP MIPMINDHEL
EALLSEAKDA GALSASYVML RLPLEVAPLF DEWLKTHYPQ RAEHVMSLVR QSRGGALYDS
RFGSRMRGEG PFADLLAQRY ALAIKRLGLN KRDGFTLDCD AFCPPGQQMS LL
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