| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5251 |
|---|
| Symbol | hemB |
|---|
| ID | 1186936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5971498 |
|---|
| End bp | 5972508 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637396570 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | NP_794982 |
|---|
| Protein GI | 28872363 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTTTA CCCCCGCCAA CCGCCTGTTT CCTCTCACTC GTCTGCGCCG TAATCGCCGC
GACGACTTTT CCCGTCGTCT GATGCGTGAG AACGTCGTTA CCGTTGATGA TCTGATTCTT
CCCGTATTTG TCCTCGATGG CGAAAACCGT CGTGAATCGA TTGCTTCCAT GCCAGGCGTC
GAGCGCCTGA GCGTTGACCT GCTGCTTGAG GAAGCCGAGC ACTGGGTCGC ACTGGGTATT
CCTGCGCTGG CGCTGTTCCC GGTGACACCG CCGGAGAAAA AATCCCTGGA CGGCGCCGAA
GCCTGGAATC CGGACGGCAT CGCTCAGCGC GCCACCCGCG CCCTGCGTGA CCGCTTCCCG
GAGCTGGGCG TCATTACTGA CGTGGCGCTG GACCCGTTCA CCACGCACGG TCAGGACGGC
ATTCTCGACG AAGAAGGCTA CGTACAGAAC GACATTACTG TCGACGCGCT GGTAAAACAG
GCGTTGTCGC ATGCCGATGC GGGCGCTCAG GTGATCGCGC CGTCGGACAT GATGGATGGC
CGCATTCAGG CCATCCGCGA GTCTCTGGAG CTGGCCGGGC ATGTCAACGT GCGGATCATG
GCCTACTCGG CCAAGTACGC CAGCGCCTAT TACGGCCCGT TCCGCGATGC AGTGGGTTCT
TCATTGAACC TGGGCAAGGC CAACAAGGCT TCCTATCAGA TGGACCCGGC CAACAGCAAC
GAGGCGCTGC ACGAAGTGGC GGCCGACCTT GCCGAAGGCG CCGACATGGT GATGGTCAAG
CCAGGCATGC CTTATCTGGA CATCCTGCAC AGGGTCAAGG ACGAGTTCAA GGTGCCGACC
TTTGTCTATC AGGTCAGCGG TGAATACGCG ATGCACATGG CAGCAATCCA GAATGGTTGG
CTGAGTGAAG GGGTGATTCT CGAATCCCTC ACTGCCTTCA AACGCGCCGG TGCCGACGGC
ATTCTTACCT ACTTCGCCGT CCGGGCTGCT CAACTGTTGA AGGGGCAATA G
|
|---|
| Protein sequence | MSFTPANRLF PLTRLRRNRR DDFSRRLMRE NVVTVDDLIL PVFVLDGENR RESIASMPGV
ERLSVDLLLE EAEHWVALGI PALALFPVTP PEKKSLDGAE AWNPDGIAQR ATRALRDRFP
ELGVITDVAL DPFTTHGQDG ILDEEGYVQN DITVDALVKQ ALSHADAGAQ VIAPSDMMDG
RIQAIRESLE LAGHVNVRIM AYSAKYASAY YGPFRDAVGS SLNLGKANKA SYQMDPANSN
EALHEVAADL AEGADMVMVK PGMPYLDILH RVKDEFKVPT FVYQVSGEYA MHMAAIQNGW
LSEGVILESL TAFKRAGADG ILTYFAVRAA QLLKGQ
|
|---|
| |