| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5246 |
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| Symbol | |
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| ID | 1186931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5965365 |
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| End bp | 5966030 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396565 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_794977 |
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| Protein GI | 28872358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTATC ACTTCGACTT TACACCGGTC CTGCAGAACA TTGATGTGCT GTTGCGCGGG
GCTTTGTTCA CGCTGGAACT GACTGCCATT GGCACCCTGC TGGGTGTCAG CCTCGGTATT
GTCGGCGCCG TCGTCAGGGC CTGGAAGATC CAGCCCTTTG CGACGATCTT CGCGATCTAC
GTCGAGCTGA TCCGTAATAC GCCGTTTCTG GTTCAGCTGT TCTTCATTTT CTTCGGTCTG
CCATCGCTGG GCGTGCAGAT CTCGGAATGG CAGGCGGCCG TGCTGGCGAT GGTGATCAAC
CTGGGCGCTT ACTCGACAGA AATCATTCGG GCAGGCATTC AGGCGATTCC CAAAGGGCAG
CTTGAAGCCT CGGCAGCGCT GGCGATGAAT CGCTATGAAG CCTTTCGCTA TGTGGTGCTG
GTCCCGGCGC TGGGCAAGGT CTGGCCGGCA CTGAGCAGCC AGATCATCAT CGTCATGCTG
GGCTCGGCGG TCTGCTCGCA GATTGCCACC GAAGAACTGA GCTTCTTTGC CAACTTCATT
CAGTCGCGCA ACTTCCGCTC GTTTGAAACC TACATTGTGA CCACGCTGAT CTACCTGGCG
ATGGCGCTGC TGATCCGCCA ACTGCTGGCC TGGATCGGGC GTCGTTACAT TTCGAGGAGC
AGCTGA
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| Protein sequence | MAYHFDFTPV LQNIDVLLRG ALFTLELTAI GTLLGVSLGI VGAVVRAWKI QPFATIFAIY
VELIRNTPFL VQLFFIFFGL PSLGVQISEW QAAVLAMVIN LGAYSTEIIR AGIQAIPKGQ
LEASAALAMN RYEAFRYVVL VPALGKVWPA LSSQIIIVML GSAVCSQIAT EELSFFANFI
QSRNFRSFET YIVTTLIYLA MALLIRQLLA WIGRRYISRS S
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