Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5243 |
Symbol | trx-2 |
ID | 1186928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5963144 |
End bp | 5963473 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637396562 |
Product | thioredoxin |
Protein accession | NP_794974 |
Protein GI | 28872355 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACG ACCTGATCAA ACACGTCACC GACGCCAGCT TTGAAGCCGA CGTACTCAAG GCTGATGGTG CTGTACTTGT TGATTACTGG GCTGAGTGGT GTGGCCCGTG CAAGATGATT GCCCCGGTAC TGGACGAAAT TGCAACTACC TATGCCGGCA AACTGACCAT TGCCAAACTG AACATCGACG AAAATCAGGA AACCCCGGCC AAGCATGGCG TGCGTGGTAT CCCGACGCTG ATGCTGTTCA AGAATGGCAA CGTCGAAGCG ACCAAAGTGG GCGCTCTGTC GAAGTCGCAG CTGGCCGCGT TTCTCGACGC CAACATCTGA
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Protein sequence | MSNDLIKHVT DASFEADVLK ADGAVLVDYW AEWCGPCKMI APVLDEIATT YAGKLTIAKL NIDENQETPA KHGVRGIPTL MLFKNGNVEA TKVGALSKSQ LAAFLDANI
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