Gene PSPTO_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5243 
Symboltrx-2 
ID1186928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5963144 
End bp5963473 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content55% 
IMG OID637396562 
Productthioredoxin 
Protein accessionNP_794974 
Protein GI28872355 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG ACCTGATCAA ACACGTCACC GACGCCAGCT TTGAAGCCGA CGTACTCAAG 
GCTGATGGTG CTGTACTTGT TGATTACTGG GCTGAGTGGT GTGGCCCGTG CAAGATGATT
GCCCCGGTAC TGGACGAAAT TGCAACTACC TATGCCGGCA AACTGACCAT TGCCAAACTG
AACATCGACG AAAATCAGGA AACCCCGGCC AAGCATGGCG TGCGTGGTAT CCCGACGCTG
ATGCTGTTCA AGAATGGCAA CGTCGAAGCG ACCAAAGTGG GCGCTCTGTC GAAGTCGCAG
CTGGCCGCGT TTCTCGACGC CAACATCTGA
 
Protein sequence
MSNDLIKHVT DASFEADVLK ADGAVLVDYW AEWCGPCKMI APVLDEIATT YAGKLTIAKL 
NIDENQETPA KHGVRGIPTL MLFKNGNVEA TKVGALSKSQ LAAFLDANI