| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5242 |
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| Symbol | rho |
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| ID | 1186927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5961653 |
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| End bp | 5962912 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637396561 |
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| Product | transcription termination factor Rho |
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| Protein accession | NP_794973 |
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| Protein GI | 28872354 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTGA CTGAACTCAA GCAAAAGCCG ATTACCGAAT TGCTCGAAAT GGCCGAACAG
GCTGGCATCG AAAATATGGC CCGTTCGCGT AAGCAGGACG TCATTTTTTC CCTGCTTAAA
CGGCACGCCA AAAGTGGCGA GGAAATATCC GGTGATGGCG TGCTGGAGAT TCTCCAGGAC
GGCTTCGGTT TCCTGCGCTC TGCAGACGCG TCCTACCTGG CCGGCCCGGA TGACATCTAC
GTCTCCCCTA GCCAGATCCG CCGTTTCAAC CTGCGTACCG GCGACACCAT CGTTGGCAAG
ATCCGTCCAC CCAAGGAAGG TGAGCGTTAT TTCGCTCTGC TCAAGGTCGA CACGATCAAC
TACGATCGTC CTGAAAACGC CAAGAACAAG ATTCTGTTCG AAAACCTGAC GCCGCTGTTC
CCGACGATCC GCATGAAGAT GGAAGCCGGT AACGGTTCCA CCGAAGACCT TACCGGTCGT
GTGATCGATC TGTGTGCACC GATCGGTAAA GGTCAGCGTG GTCTGATCGT TGCTCCGCCA
AAAGCGGGCA AGACCATCAT GCTGCAGAAC ATCGCGTCGA ACATCACGCG TAACAACCCG
GAAGTGCATC TGATCGTTCT GTTGATCGAC GAGCGCCCGG AAGAGGTGAC CGAAATGCAG
CGCACCGTGC GCGGCGAAGT GGTTGCCTCG ACATTCGACG AACCGCCAAC CCGTCACGTA
CAGGTTGCCG AAATGGTGAT CGAAAAGGCC AAGCGCCTGG TCGAGCACAA GAAAGACGTC
GTTATCCTGC TCGACTCCAT CACCCGTCTG GCGCGCGCCT ATAACACCGT CATCCCGAGC
TCCGGCAAGG TACTGACCGG TGGTGTCGAC GCTCACGCAC TCGAAAAGCC AAAGCGTTTC
TTCGGTGCTG CGCGAAACAT CGAAGAAGGC GGCTCGCTGA CTATCATCGC CACCGCACTG
GTTGAAACCG GTTCGAAGAT GGATGAAGTC ATCTACGAAG AGTTCAAGGG TACGGGCAAC
ATGGAGCTGC CTCTGGATCG CAAGATCGCC GAGAAGCGCG TGTTCCCGGC CATCAACATC
AACCGCTCCG GCACACGCCG CGAAGAGCTG TTGACCGCTG ATGACGAGTT GCAGCGCATG
TGGATCCTGC GCAAGCTGCT GCACCCGATG GACGAAGTCG CGGCTATCGA GTTCCTCATC
GACAAGCTCA AGCAGACCAA GACCAACGAC GAGTTCTTCC TGTCCATGAA ACGCAAGTAA
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| Protein sequence | MNLTELKQKP ITELLEMAEQ AGIENMARSR KQDVIFSLLK RHAKSGEEIS GDGVLEILQD
GFGFLRSADA SYLAGPDDIY VSPSQIRRFN LRTGDTIVGK IRPPKEGERY FALLKVDTIN
YDRPENAKNK ILFENLTPLF PTIRMKMEAG NGSTEDLTGR VIDLCAPIGK GQRGLIVAPP
KAGKTIMLQN IASNITRNNP EVHLIVLLID ERPEEVTEMQ RTVRGEVVAS TFDEPPTRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD AHALEKPKRF
FGAARNIEEG GSLTIIATAL VETGSKMDEV IYEEFKGTGN MELPLDRKIA EKRVFPAINI
NRSGTRREEL LTADDELQRM WILRKLLHPM DEVAAIEFLI DKLKQTKTND EFFLSMKRK
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