| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5240 |
|---|
| Symbol | |
|---|
| ID | 1186925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5959090 |
|---|
| End bp | 5960058 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637396559 |
|---|
| Product | oxidoreductase, iron-sulfur-binding protein |
|---|
| Protein accession | NP_794971 |
|---|
| Protein GI | 28872352 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTAA CCTTGCAGCC CTCGGGTGCG GTACTCGAAA CCCTGCCGGG CGAGCGGATT
CTGGATGCTG CACAGCGGCT GGGCCATGAA TGCCCGCAAA GCTGTCGCAA CGGTAACTGC
CATGTCTGCT CGGCCTTGCT GGTCGAAGGC CGGGTCATGC AGTCGGGGCA GGTGCTCGAC
CACGGCGAGA TTCATACGTG TGTGGCCGAA CCGCTGGAAG CGTGCGTCGT GCTGTGGGAT
GGCGTGCTGG CCAAAGGTGA ACTGCCGGTA CGCAGTTTTG CCTGCCAGTT GAGCGAGTGT
GTCGAGATCG GTGGCGACGT CTGGCGTGTG GGCCTGCGCG CGCCGGCCGG CAAACCGCCG
CGCTATCACG CCGGGCAGTA CCTGATGATC GAGCGGGAGA ACGGCGAGAA GTCGGCGTTT
TCCATCGCAT CAGCGCCGCA CAGCGGTCGT GAGCTGGAGC TGCACGTGCT GGCCCGCGAA
GACAGCGCAC GCAGCCTTAT CGAACAACTG CAACGCAATA AAATGGCGCG GGTCGAACTG
CCGTTTGGCG ACACCCACCT TGCCGAGTTG CCGAACGGGC CTTTGGTGCT GATCGCTGCC
GGTACGGGCA TGGCGCAAAT GAACAGTTTG TTGGAACACT GTCGCTCCAC AGGCTTTAGT
CATCCTGTGC ACCTGTACTG GGGCGTGCGT CGCCCCGAGG ATTTTTACCA GGTCAGCCAC
TGGGATGAGT GGGCAACCCT GCCGAACCTG TTCCTGCACA AGGTCGTCAG CGATCTGTGC
GGTTGGGAAG GGCGCTGCGG CCTGCTGCAC GAGGCAGTTT GCGAGGACAT CAAGGATCTC
TCGGCGGTTC ACGTGTACGC CAGCGGTTCG CCGGCAATGA TCTACGGGAC GCTGGACGCG
CTTGTCAGTG CCGGTATGGA TGCGCATCAA ATGCGCGCAG ACGTGTTTGC CTACGCACCA
CGTCCGTGA
|
|---|
| Protein sequence | MRVTLQPSGA VLETLPGERI LDAAQRLGHE CPQSCRNGNC HVCSALLVEG RVMQSGQVLD
HGEIHTCVAE PLEACVVLWD GVLAKGELPV RSFACQLSEC VEIGGDVWRV GLRAPAGKPP
RYHAGQYLMI ERENGEKSAF SIASAPHSGR ELELHVLARE DSARSLIEQL QRNKMARVEL
PFGDTHLAEL PNGPLVLIAA GTGMAQMNSL LEHCRSTGFS HPVHLYWGVR RPEDFYQVSH
WDEWATLPNL FLHKVVSDLC GWEGRCGLLH EAVCEDIKDL SAVHVYASGS PAMIYGTLDA
LVSAGMDAHQ MRADVFAYAP RP
|
|---|
| |