Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5235 |
Symbol | |
ID | 1186920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5955571 |
End bp | 5955927 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637396554 |
Product | hypothetical protein |
Protein accession | NP_794966 |
Protein GI | 28872347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTGCG TGCTGGGTTG CATGATGATT ACGGGGTTGC TTTGGGCGGG GCGGCCACAT ACCAACCCGC CGCTGGCATC CAATGTCGAG CTGAAGCAGG TGTTGTGCTG GCAGTTGAAT ACAGAAATGT TCGAGGGACG CAAATGGCGC AAGGACGTCA AACCGGATGC GCTGATGCGC ACAGAACTGT ACCTGTCGAG CAGTCCGGTC ATAGAGCAGT TTCTCACCCT GGACGAGCGT CAGGCCCTGG TTCTTGAGCT GCTGGAAGCG ACGCCGGGCA TCGTCGCTCA ATGTCAAAAA AATCCGATGC GCAGGTATGT TGATTATTTG CCGGAGAGTG TGAGGAAGGC GCTGTAA
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Protein sequence | MSCVLGCMMI TGLLWAGRPH TNPPLASNVE LKQVLCWQLN TEMFEGRKWR KDVKPDALMR TELYLSSSPV IEQFLTLDER QALVLELLEA TPGIVAQCQK NPMRRYVDYL PESVRKAL
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