Gene PSPTO_5230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5230 
Symbol 
ID1186915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5950789 
End bp5951196 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content56% 
IMG OID637396549 
Productflagellar protein FliL, putative 
Protein accessionNP_794961 
Protein GI28872342 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.59583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCGT GGATTCTGGT ATTGCTGGCC TTGTCATTGC CTGTCATGGC GCAGGAAGAG 
GCCAAGGAAG AAGGTGGCCC ACCCAAAGCG GCTTATGTGT CGCTGACGCC GCCGTTCGTG
GGCAACTACG CGCTGGATGG TGGCCCCAAG CTGCGCGTCT ACAAGGCAGA CATCGCCTTG
CGCGTAACCG GTGCCGATGC CGAGGCGGCG GTGAAGCGCA ATGACGCCTT GATTCGCAAT
CAACTGGTGT CGCTGTTTAC TCAGCAGACG GTTGATTCGA TGAGCAGCGC AGAAGCGAAG
GAAAACATTC GTCAGGAAGC GCTCAAGCAG GTTCAGCGCG TCATGAATGA TGAAGAAGGC
AAGCCGATTG TCGAAGACTT GCTGTTCAAT AACTTCATCG TTCAGTAA
 
Protein sequence
MKAWILVLLA LSLPVMAQEE AKEEGGPPKA AYVSLTPPFV GNYALDGGPK LRVYKADIAL 
RVTGADAEAA VKRNDALIRN QLVSLFTQQT VDSMSSAEAK ENIRQEALKQ VQRVMNDEEG
KPIVEDLLFN NFIVQ