| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5222 |
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| Symbol | ubiH |
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| ID | 1186907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5945190 |
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| End bp | 5946377 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637396541 |
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| Product | 2-octaprenyl-6-methoxyphenyl hydroxylase |
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| Protein accession | NP_794953 |
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| Protein GI | 28872334 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCT TCAATATTGC CATCGTGGGC GGCGGGTTGG TCGGTGCAAG CCTTGCGCTT
GCGCTACAGG CGGGTGCCAA GGCGCGTGGC TGGAAGATCG TGCTCATCGA ACCCTTCGCC
CCGGGAGACG CCTGGCAACC CAGCTACGAC GCGCGCTCTT CGGCGCTGTC GTTCGGCGCA
CGGCGCATCT ACGAGCGACT GGGCCTGTGG CAGCAGATTT CCCGACGTGC CGAGCCCATT
CTGCAAATTC AGGTGTCGGA CCGCGGCCGC TTTGGCGCTA CGCGCTTGTC TGCGATTGAA
GAAGGTGTGC CGGCGCTCGG CTATGTCGTG GAAAACGCCT GGCTGGGGCA GTCGCTCTGG
GCTGGGCTGG ACCGTGACGT GGTCAGTTGG CGCGTGCCGG CCGAGGTCAG GCAGATGCAG
CCGCTGGCCG ATGGTTATCG CCTGACCCTC AGTGATGAAA CCGAGCTGGA ATGCGATCTG
GCCGTGCTGG CCGATGGCGG TCGTTCCAGC CTGCGTGAGC AACTGGGTAT CGGTGTACGG
CAGCGGCCTT ACGATCAAAG CGCGCTGATC GCCAACATCT CGCCGGGCGA GGCACATTGC
GGGCAGGCGT TCGAGCGCTT CACCGACGAC GGGCCGATGG CCTTGCTGCC ATTGCCGGAC
AATCGCTGTG CGCTGGTCTG GACGCGACCG GGCAACGACA CTCAACGTCT TGCCGAGCTG
GACGACCGCA GTTTTCTGGA AGAGCTTCAA GGCGTGTTCG GTTATCGCCT CGGCACCCTT
CGTCAGGTCG GCGCGCGGCA TGTCTACCCG TTGGCGCTGG TCGAGGCCGA AGAGCAAGTG
CGCTCGCATC TGGTGATTCT GGGCAATGCG GCGCACAGCC TGCACCCGAT TGCCGGGCAG
GGGTTCAACC TTTCCCTTCG CGACGCCGAT GCACTGGCCC AGACGCTGCT GGAGAGCGAC
GCGCCGCTCG GCGATCTGCC GACCCTGCAG CTCTACCGCG AGCGCCAGCG TCAGGATCAG
CAATTGACCG TGGGTTTCTC CGACAAGGTG ACGCGGCTGT TCGGCAGCAC TCAGTCGGCC
GTCACCACCG GACGCAACCT CGGGCTGCTG GGGCTGGACC TCTTGCCCGC CGCCAAGCGT
TGGTTTGCCC GTCAGGCAAT GGGTTTGGGG ACTCGATCCG ATGTTTGA
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| Protein sequence | MSRFNIAIVG GGLVGASLAL ALQAGAKARG WKIVLIEPFA PGDAWQPSYD ARSSALSFGA
RRIYERLGLW QQISRRAEPI LQIQVSDRGR FGATRLSAIE EGVPALGYVV ENAWLGQSLW
AGLDRDVVSW RVPAEVRQMQ PLADGYRLTL SDETELECDL AVLADGGRSS LREQLGIGVR
QRPYDQSALI ANISPGEAHC GQAFERFTDD GPMALLPLPD NRCALVWTRP GNDTQRLAEL
DDRSFLEELQ GVFGYRLGTL RQVGARHVYP LALVEAEEQV RSHLVILGNA AHSLHPIAGQ
GFNLSLRDAD ALAQTLLESD APLGDLPTLQ LYRERQRQDQ QLTVGFSDKV TRLFGSTQSA
VTTGRNLGLL GLDLLPAAKR WFARQAMGLG TRSDV
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