Gene PSPTO_5222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5222 
SymbolubiH 
ID1186907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5945190 
End bp5946377 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID637396541 
Product2-octaprenyl-6-methoxyphenyl hydroxylase 
Protein accessionNP_794953 
Protein GI28872334 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCT TCAATATTGC CATCGTGGGC GGCGGGTTGG TCGGTGCAAG CCTTGCGCTT 
GCGCTACAGG CGGGTGCCAA GGCGCGTGGC TGGAAGATCG TGCTCATCGA ACCCTTCGCC
CCGGGAGACG CCTGGCAACC CAGCTACGAC GCGCGCTCTT CGGCGCTGTC GTTCGGCGCA
CGGCGCATCT ACGAGCGACT GGGCCTGTGG CAGCAGATTT CCCGACGTGC CGAGCCCATT
CTGCAAATTC AGGTGTCGGA CCGCGGCCGC TTTGGCGCTA CGCGCTTGTC TGCGATTGAA
GAAGGTGTGC CGGCGCTCGG CTATGTCGTG GAAAACGCCT GGCTGGGGCA GTCGCTCTGG
GCTGGGCTGG ACCGTGACGT GGTCAGTTGG CGCGTGCCGG CCGAGGTCAG GCAGATGCAG
CCGCTGGCCG ATGGTTATCG CCTGACCCTC AGTGATGAAA CCGAGCTGGA ATGCGATCTG
GCCGTGCTGG CCGATGGCGG TCGTTCCAGC CTGCGTGAGC AACTGGGTAT CGGTGTACGG
CAGCGGCCTT ACGATCAAAG CGCGCTGATC GCCAACATCT CGCCGGGCGA GGCACATTGC
GGGCAGGCGT TCGAGCGCTT CACCGACGAC GGGCCGATGG CCTTGCTGCC ATTGCCGGAC
AATCGCTGTG CGCTGGTCTG GACGCGACCG GGCAACGACA CTCAACGTCT TGCCGAGCTG
GACGACCGCA GTTTTCTGGA AGAGCTTCAA GGCGTGTTCG GTTATCGCCT CGGCACCCTT
CGTCAGGTCG GCGCGCGGCA TGTCTACCCG TTGGCGCTGG TCGAGGCCGA AGAGCAAGTG
CGCTCGCATC TGGTGATTCT GGGCAATGCG GCGCACAGCC TGCACCCGAT TGCCGGGCAG
GGGTTCAACC TTTCCCTTCG CGACGCCGAT GCACTGGCCC AGACGCTGCT GGAGAGCGAC
GCGCCGCTCG GCGATCTGCC GACCCTGCAG CTCTACCGCG AGCGCCAGCG TCAGGATCAG
CAATTGACCG TGGGTTTCTC CGACAAGGTG ACGCGGCTGT TCGGCAGCAC TCAGTCGGCC
GTCACCACCG GACGCAACCT CGGGCTGCTG GGGCTGGACC TCTTGCCCGC CGCCAAGCGT
TGGTTTGCCC GTCAGGCAAT GGGTTTGGGG ACTCGATCCG ATGTTTGA
 
Protein sequence
MSRFNIAIVG GGLVGASLAL ALQAGAKARG WKIVLIEPFA PGDAWQPSYD ARSSALSFGA 
RRIYERLGLW QQISRRAEPI LQIQVSDRGR FGATRLSAIE EGVPALGYVV ENAWLGQSLW
AGLDRDVVSW RVPAEVRQMQ PLADGYRLTL SDETELECDL AVLADGGRSS LREQLGIGVR
QRPYDQSALI ANISPGEAHC GQAFERFTDD GPMALLPLPD NRCALVWTRP GNDTQRLAEL
DDRSFLEELQ GVFGYRLGTL RQVGARHVYP LALVEAEEQV RSHLVILGNA AHSLHPIAGQ
GFNLSLRDAD ALAQTLLESD APLGDLPTLQ LYRERQRQDQ QLTVGFSDKV TRLFGSTQSA
VTTGRNLGLL GLDLLPAAKR WFARQAMGLG TRSDV