Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5203 |
Symbol | |
ID | 1186888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5923177 |
End bp | 5924256 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637396522 |
Product | hypothetical protein |
Protein accession | NP_794934 |
Protein GI | 28872315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTG GATTACTCGA ACAGCGCGCT AACTACCCTC ACACGGGGTA TGAGTATGGT TATGGCAGCA CTGGTAACAG CGATGCCGAT GGTAACGGTC GCAAAGAGAT AGACTGCTCG CATCTCCTGA CCAAAATGCT CACTGGCGCG GGCTATACCA TCCCTTACAA AACCACGAGG GAGTTAGCGT CAGACACCAC CCACTACGAT TTCATTGCTC TGAATGATGT CCAGGAGGGT GATATTGCCC TGTGGACGAC AAGGGGGCAT ACCGGTGTGG TCGAAAAAAT GGAAGCAACC CGCACCAAGG GTGAATTCTT TGGATCGCAA ACCTCTACGG GACCAAAGTC CGCAAAATTC GGCGCTGGCG CTTACTGGCC GATGCCCGAC AAATATCTGA GGCCTAAAGC CCAGTATCGA AGCGGAGCGC AACCGGCACC TGCTCCGGCG CCTGCCGGGC CAGCACCCTT GATGAATTTC CAATATCCGT TCCGTAAGGC TGACGGGAAG CAGTTCATCG ATGCAGAAGA AGTCTATAAG GCGTTGGAAG GAGAGACATC CGGCCACTAC CTGCTGGGCA ATAACAAATT TTGGCACGGT GGTATCCACA TAAGCGACAA GAGCGCCCCG CAATGTGTGT TGAATGAGCC CGTACGCTGT ATGGCCGACG GCGAGGTTGT GGCTTATCGT CTGAATAAGG ATTATCTGGA ATCCACGTTT GGTGATAACG AGAAAAAACT CAAATACTCC AGCTCCTTTT GCCTGGTGCG TCACGAGTAC AAATCAGCGC CTAATCCCGA GGAGGGAGCT AATAAATGCA AGCAGAACAA GCTGACGTTT TACAGCTTGT ATATGCATCT GTTGCCGTTT GCGCGTTACC CCTTATCACC TGCAGAAACG CCTAAACCCA AGGTGACCAT GAAGGTTGGA GATTTCAGGG CTTACGACAC CGCTCCAGCA CCCGGAGTGA CCACTGCGTC CTGCGGACAA CTGGCAATCG GCACCAAGTT AGAATCATCG AGACCGCCGA GAATGGCGAA CTTACTTATG CCAAGGGTAA GATTCTATCT GGCAGCGTGA
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Protein sequence | MSTGLLEQRA NYPHTGYEYG YGSTGNSDAD GNGRKEIDCS HLLTKMLTGA GYTIPYKTTR ELASDTTHYD FIALNDVQEG DIALWTTRGH TGVVEKMEAT RTKGEFFGSQ TSTGPKSAKF GAGAYWPMPD KYLRPKAQYR SGAQPAPAPA PAGPAPLMNF QYPFRKADGK QFIDAEEVYK ALEGETSGHY LLGNNKFWHG GIHISDKSAP QCVLNEPVRC MADGEVVAYR LNKDYLESTF GDNEKKLKYS SSFCLVRHEY KSAPNPEEGA NKCKQNKLTF YSLYMHLLPF ARYPLSPAET PKPKVTMKVG DFRAYDTAPA PGVTTASCGQ LAIGTKLESS RPPRMANLLM PRVRFYLAA
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