Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5194 |
Symbol | |
ID | 1186879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5912741 |
End bp | 5913538 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637396513 |
Product | hypothetical protein |
Protein accession | NP_794925 |
Protein GI | 28872306 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCGGCA TGCCTCAGCC AATCAGTCTG TGCCAATACA GCTACGACGC ACTGGACCGT ATCGCGACCC GCACGCCGCT CGCCAGGGCT ATCGCTGGAA TATCCCGGCA GTCCGGCCCG CGGCCGGGTT TCAATGGCGA ACTTCTGGAC GACATAACCG GCCACTATCT GCTGGGCAAC GGCTATCGCG CCTACAACCC GGTGCTGATG CGCTTCAACA GCCCCGACAG CCTGAGCCCG TTTGGCGAGG GTGGTTTGAA TGCCTATGCC TATTGCGCGG GGGACCCGGT CAATCGTTCT GATCCGTCAG GGCATGGTTT TCTTGAGGAT CTGGAATCCT CCCTCTACAT CGGTGCTGCG GTCCTGAACG GCATTATGGG TTTGCTGGCG GTCCGTGCGC CTATAAGAGC TGTATTTAAA GGTGTCAAAG TGAAGCCTCA GGCTGTTGTC GCCGGCAATA ATCTGACTTC TCCAGTACAG GCGACCAGAA GACCGGCAAC TCGAGCGGAA AAAATCTCGG CATTCACCGG AGTGTCTGCA CTGGTTGCCA CTGCGGCATG GGCCGCTTCC TTCGCTCTGA CAAAAACTGA CCCTGAATCA CCAGCAATCC ACCCGCTGAG AATTGCCGCT ATCCTTATTG CCTACCCGAC GGCTGGGCTG CGTGGCTGGT CAATTGCTCG TTCCATAATG GACAAGCGGG TCCAGAAGGC AGTGCCTGTC ATTAACGTCA ATAAACCCTT AGACGATGCT TCGGGCATTC GAGAGTGGGG GTTGGTGGTC GCTGTTAACG GTCGTTGA
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Protein sequence | MLGMPQPISL CQYSYDALDR IATRTPLARA IAGISRQSGP RPGFNGELLD DITGHYLLGN GYRAYNPVLM RFNSPDSLSP FGEGGLNAYA YCAGDPVNRS DPSGHGFLED LESSLYIGAA VLNGIMGLLA VRAPIRAVFK GVKVKPQAVV AGNNLTSPVQ ATRRPATRAE KISAFTGVSA LVATAAWAAS FALTKTDPES PAIHPLRIAA ILIAYPTAGL RGWSIARSIM DKRVQKAVPV INVNKPLDDA SGIREWGLVV AVNGR
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