Gene PSPTO_5194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5194 
Symbol 
ID1186879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5912741 
End bp5913538 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content57% 
IMG OID637396513 
Producthypothetical protein 
Protein accessionNP_794925 
Protein GI28872306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCGGCA TGCCTCAGCC AATCAGTCTG TGCCAATACA GCTACGACGC ACTGGACCGT 
ATCGCGACCC GCACGCCGCT CGCCAGGGCT ATCGCTGGAA TATCCCGGCA GTCCGGCCCG
CGGCCGGGTT TCAATGGCGA ACTTCTGGAC GACATAACCG GCCACTATCT GCTGGGCAAC
GGCTATCGCG CCTACAACCC GGTGCTGATG CGCTTCAACA GCCCCGACAG CCTGAGCCCG
TTTGGCGAGG GTGGTTTGAA TGCCTATGCC TATTGCGCGG GGGACCCGGT CAATCGTTCT
GATCCGTCAG GGCATGGTTT TCTTGAGGAT CTGGAATCCT CCCTCTACAT CGGTGCTGCG
GTCCTGAACG GCATTATGGG TTTGCTGGCG GTCCGTGCGC CTATAAGAGC TGTATTTAAA
GGTGTCAAAG TGAAGCCTCA GGCTGTTGTC GCCGGCAATA ATCTGACTTC TCCAGTACAG
GCGACCAGAA GACCGGCAAC TCGAGCGGAA AAAATCTCGG CATTCACCGG AGTGTCTGCA
CTGGTTGCCA CTGCGGCATG GGCCGCTTCC TTCGCTCTGA CAAAAACTGA CCCTGAATCA
CCAGCAATCC ACCCGCTGAG AATTGCCGCT ATCCTTATTG CCTACCCGAC GGCTGGGCTG
CGTGGCTGGT CAATTGCTCG TTCCATAATG GACAAGCGGG TCCAGAAGGC AGTGCCTGTC
ATTAACGTCA ATAAACCCTT AGACGATGCT TCGGGCATTC GAGAGTGGGG GTTGGTGGTC
GCTGTTAACG GTCGTTGA
 
Protein sequence
MLGMPQPISL CQYSYDALDR IATRTPLARA IAGISRQSGP RPGFNGELLD DITGHYLLGN 
GYRAYNPVLM RFNSPDSLSP FGEGGLNAYA YCAGDPVNRS DPSGHGFLED LESSLYIGAA
VLNGIMGLLA VRAPIRAVFK GVKVKPQAVV AGNNLTSPVQ ATRRPATRAE KISAFTGVSA
LVATAAWAAS FALTKTDPES PAIHPLRIAA ILIAYPTAGL RGWSIARSIM DKRVQKAVPV
INVNKPLDDA SGIREWGLVV AVNGR