| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5191 |
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| Symbol | |
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| ID | 1186876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5907261 |
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| End bp | 5910362 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396510 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_794922 |
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| Protein GI | 28872303 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGGA ATTTCAATTT ATCCGAGTGG GCCATCAAGC ATCAGTCGTT TGTCTGGTAC
CTGATGTTCG TCGCGCTGTT GATGGGCGTG TTTTCCTACA TGAAGCTTGG GCGCGAGGAA
GACCCGTCCT TCACCATCAA AACCATGATT ATCCAGACCC GCTGGCCGGG CGCGACGGTG
GACGAGACCC TGGAGCAGGT GACCGACCGC ATCGAGAAGA AGCTTGAAGA GCTGGACTCG
CTGGACTACG TGAAAAGCTA TACCCGACCG GGCGAGTCCA CGGTCTTCGT TTACCTGCGT
GACACTACCA ACGCCAAGGC GATACCGGAG ATCTGGTATC AGGTGCGCAA GAAGGTCGAT
GACATCCGCG GCCAGTTCCC GCAGGGGCTG CAAGGCCCGT CGTTCAACGA TGAGTTCGGC
GATGTGTACG GTTCGATCTA TGCGTTTACC GCAGACGGCT TTTCAATGCG TCAGTTGCGT
GATTACGTCG AGAAGGTTCG TGCCGACATC CGCGAAGTGC CGGGTCTGGG CAAGGTCGAG
ATGATCGGCC AGCAGGATGA AGTGCTGTAC CTGAACTTCT CCACCCGCAA GCTCGCGGCA
TTGGGCATCG ATCAGAGCCA GGTGGTGCAA AGCCTGCAAT CGCAGAACGC GGTGACGCCT
GCCGGGGTGA TAGAAGCCGG GCCGGAGCGG ATATCTGTGC GCACGTCTGG CCAGTTTGCT
TCCGAGAAGG ATCTGGCAAC GGTCAATCTG CGGATCAACG ACCGCTTTTA CCGCCTGAGC
GACATTGCCG ACATCACGCG CGGCTATACC GATCCGCCCA AACCGCTGTT TCGCTTTAAC
GGCAAACCGG CCATCGGCCT GTCCATCGCC ATGCAGAAGG GCGGCAACAT CCAGGCGTTC
GGCAAGGCGC TGCACGAGCG CATGGACGCC ACGACCGCCG AGCTGCCGGT GGGTATCGGC
GTACACAAGG TCTCCGATCA GGCCGAGGTG GTGAACAAGG CCGTGGGCGG CTTCACCAGC
GCGTTGTTCG AGGCGGTGAT CATCGTGCTG CTGGTCAGCT TCGTCAGCCT CGGATTTCGC
GCGGGGTTGG TGGTCGCGTG TTCGATTCCG CTGGTGCTGG CGATGGTGTT TGTGTTCATG
GAATACAGCG GCATCACCAT GCAACGGATT TCCCTCGGCG CGCTGATCAT CGCCCTCGGT
CTGTTGGTGG ATGACGCCAT GATCACCGTG GAAATGATGG TCACACGGCT GGAAATGGGT
GAAACCAAGG AGCAGGCCGC GACTTACGCC TATACCTCCA CAGCGTTCCC GATGCTCACC
GGGACGCTGG TGACCGTGGC CGGCTTTGTG CCGATCGGTC TGAACAACAG CTCGGCGGGG
GAGTACACCT TTACACTGTT TGCTGTGATT GCCGTGGCGA TGCTGGTGTC GTGGGTGGTT
GCCGTGCTGT TTGCGCCGGT GATCGGCGTG CACATTCTGA GCGCCAACAT CAAGCCCAAA
TCCGAAGAGC CGGGCCGCAT AGGCCGGGCA TTCAACAGCA GCATGCTTTG GGCCATGCGC
CATCGCTGGC TGGCGATTGG CATCACGGTA GGGTTGTTCG CTGCGTCACT GTTCTCCATG
CAGTTCGTAC AGAACCAGTT CTTCCCGTCT TCTGACCGCC CGGAAATTCT TGTCGACCTG
AACCTGCCGC AAAACGCCTC GATCAACGAG ACGCGCAAGG TGGTGGACCG TTTCGAAGCG
AGCCTCAAGG ACGATCCGGA CATCGAGCGC TGGAGCACCT ACATCGGGCA GGGGTCGGTG
CGTTTTTACC TGCCGCTCGA TCAGCAACTG GAAAACCCGT TCTATGCCCA GTTGGTGATT
GTCAGTAAAG GCCTGGAAGA GCGGGGCGCA CTGACCGCGC GTCTGCAAAA GCGCCTGCGT
GATGATTTCG TCGGCATCGG TTCCTACGTG CAAGCCCTGG AAATGGGCCC GCCGGTGGGG
CGTCCGCTGC AGTATCGCGT CAGTGGCGAG AGCATCGACA AAGTGCGTCA GCATGCCATC
GAGCTGGCCA CGCTGCTGGA CCACAACCCG CATGTGGGCG AAGTGATCTA CGACTGGAAC
GAGCCGGGCA AGGTTTTGCG CATCGACATC AATCAGGACA AGGCCAGACA ACTGGGGCTG
TCGTCCGAGG ACGTCGCCAA GTTGATGAAC AGCGTGGTCA GCGGCTCTAC CGTGACGCAG
GTGCGTGATG ACATCTACCT GATCAACGTG GTCGGACGCG CTGAAGACGC CGAGCGTGGT
ACGCCGGAAA CGCTGCAGAA CCTGCAGATC GTGACCCCGA CCGGAACCTC GATTCCGCTG
CTGGCGTTCG CCACTGTTGG CTATGAGCTT GAGCAGCCGC TGGTCTGGCG ACGTGATCGC
AAGCCGACCA TCACCGTGAA AGGCTCGGTG CGCGACGAAA TTCAGCCGAC CGATCTGGTC
AATCAGCTGA AGCCGGAAAT CGACAAGTTT GCAGCCGGTT TGCCGGTGGG CTACAAGGTC
GCGACCGGTG GCACGGTTGA GGAAAGCAGC AAGGCGCAGG GGCCGATTGC CAGTGTTGCG
CCGCTGATGC TGTTCCTTAT GGCGACGTTC CTGATGATCC AGTTGCACAG CGTGCAGAAG
ATGTTCCTGG TGGCCAGTGT CGCGCCGCTC GGGCTGATCG GCGTGGTGCT TGCGCTTATT
CCGACGGGTA CGCCGCTGGG GTTTGTGGCG ATTCTCGGGG TGCTGGCGCT GATCGGCATC
ATCATCCGCA ACTCGGTGAT TCTGGTGACC CAGATCGATG CCTATGAAAA GAGTGGCTAT
CTGCCTTGGG ACGCTGTGGT CGAAGCCACC GAGCACCGCC GTCGGCCGAT TTTGCTGACC
GCCGCAGCGG CCAGCCTGGG CATGATCCCT ATTGCCCGCG AAGTGTTCTG GGGGCCGATG
GCCTACGCCA TGATTGGCGG CATCATCATC GCCACGCTGC TGACCTTGCT GTTTCTGCCA
GCGCTGTACG TGGCCTGGTA TCGCATTAAG GAGCCGAGCG ACGAACAGCG TCAGGAAGCC
GAAGACAAGG ACGAGGATGA AAACGCGCAG CCTGCGCATT GA
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| Protein sequence | MKGNFNLSEW AIKHQSFVWY LMFVALLMGV FSYMKLGREE DPSFTIKTMI IQTRWPGATV
DETLEQVTDR IEKKLEELDS LDYVKSYTRP GESTVFVYLR DTTNAKAIPE IWYQVRKKVD
DIRGQFPQGL QGPSFNDEFG DVYGSIYAFT ADGFSMRQLR DYVEKVRADI REVPGLGKVE
MIGQQDEVLY LNFSTRKLAA LGIDQSQVVQ SLQSQNAVTP AGVIEAGPER ISVRTSGQFA
SEKDLATVNL RINDRFYRLS DIADITRGYT DPPKPLFRFN GKPAIGLSIA MQKGGNIQAF
GKALHERMDA TTAELPVGIG VHKVSDQAEV VNKAVGGFTS ALFEAVIIVL LVSFVSLGFR
AGLVVACSIP LVLAMVFVFM EYSGITMQRI SLGALIIALG LLVDDAMITV EMMVTRLEMG
ETKEQAATYA YTSTAFPMLT GTLVTVAGFV PIGLNNSSAG EYTFTLFAVI AVAMLVSWVV
AVLFAPVIGV HILSANIKPK SEEPGRIGRA FNSSMLWAMR HRWLAIGITV GLFAASLFSM
QFVQNQFFPS SDRPEILVDL NLPQNASINE TRKVVDRFEA SLKDDPDIER WSTYIGQGSV
RFYLPLDQQL ENPFYAQLVI VSKGLEERGA LTARLQKRLR DDFVGIGSYV QALEMGPPVG
RPLQYRVSGE SIDKVRQHAI ELATLLDHNP HVGEVIYDWN EPGKVLRIDI NQDKARQLGL
SSEDVAKLMN SVVSGSTVTQ VRDDIYLINV VGRAEDAERG TPETLQNLQI VTPTGTSIPL
LAFATVGYEL EQPLVWRRDR KPTITVKGSV RDEIQPTDLV NQLKPEIDKF AAGLPVGYKV
ATGGTVEESS KAQGPIASVA PLMLFLMATF LMIQLHSVQK MFLVASVAPL GLIGVVLALI
PTGTPLGFVA ILGVLALIGI IIRNSVILVT QIDAYEKSGY LPWDAVVEAT EHRRRPILLT
AAAASLGMIP IAREVFWGPM AYAMIGGIII ATLLTLLFLP ALYVAWYRIK EPSDEQRQEA
EDKDEDENAQ PAH
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