Gene PSPTO_5189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5189 
SymbolmetI-1 
ID1186874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5905683 
End bp5906327 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID637396508 
ProductD-methionine ABC transporter, permease protein 
Protein accessionNP_794920 
Protein GI28872301 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGTTG ATCGCTTGCT GCAAGGCACT CTCGACACGT TTCTGATGGT CGGTGTGTCG 
TCATTGATCG CGTTGCTGCT GGGCATCCCG CTGGCAGTGA TTCTGGTCAC CAGTTCCAAA 
GGCGGCATCT ACGAGGCACC GGCGATCAAT CGGGTGCTGG GCGGCTTTGT GAACCTGTTT 
CGCTCGATTC CCTTTTTGAT CCTGATGGTG GCGCTGATCC CGTTCACGCG GATGATCGTC 
GGCACCACCT ATGGCGTGTG GGCGGCGGTA GTGCCGCTGA CCATCGCCGC CACGCCGTTC 
TTCGCGCGTA TCGCCGAAGT GAGCCTGCGC GAGGTCGATC ACGGGCTGAT AGAAGCCGCG 
CAGGCGATGG GCTGTCGGCG CTGGCACATC ATCTGGCATG TGCTGCTGCC CGAAGCGCGT 
CCCGGCATTG TCGGCGGCTT TACCATCACA TTGGTGACCA TGATCAACTC ATCGGCCATG 
GCCGGTGCGA TTGGCGCAGG CGGGCTGGGC GACATTGCCT ATCGCTACGG CTATCAGCGC 
TTTGACACAC AGGTGATGCT GACTGTGATT GTATTGCTGG TGGCCGTGGT GGCGCTGGTG 
CAACTGGGCG GTGACCGGCT GGCGCGCAGC TTCGACAGAC GCTGA
 
Protein sequence
MWVDRLLQGT LDTFLMVGVS SLIALLLGIP LAVILVTSSK GGIYEAPAIN RVLGGFVNLF 
RSIPFLILMV ALIPFTRMIV GTTYGVWAAV VPLTIAATPF FARIAEVSLR EVDHGLIEAA 
QAMGCRRWHI IWHVLLPEAR PGIVGGFTIT LVTMINSSAM AGAIGAGGLG DIAYRYGYQR 
FDTQVMLTVI VLLVAVVALV QLGGDRLARS FDRR