| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5184 |
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| Symbol | |
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| ID | 1186869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5899755 |
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| End bp | 5901077 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396503 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | NP_794915 |
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| Protein GI | 28872296 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.995233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCCTT TCACAACTAC CCCTGTGGAT AAACCCAGGG CTGTGCCGAC TGCCAGTGAG
CGACGCGAGT CTGATCCGGC GACAGTTACC GCCCACCACG TCACGGCTTC ACAAGAGCCA
GACGTCGCTC CCCGCCTGCT ACCGGCCACA GTATTGCAAA ACGACGCTGA GGCCATTGCG
GCGGCTCATC GGTTGGCCGC TTCTGCACGG CTCAATGCCG CTACGCGCGA TCAGCAGCGC
GCCTTGCCGT GGGCTGAAAT CGAACACTTC ACGCGCAGCG GGCTGGGCAG CATTTCCATT
CCCCGTGCCT ACGGTGGTCC GCAAGTCTCG TTCGCCACCG TGGCGGAGGT GTTCAGGATC
ATTTCGACCG CCGACCCTGC GCTTGGGCAG ATCCCGCAAA ACCAGTTCGG CATCCTGAAT
CTGCTGCAAA GCAGTGCCAC CGAACAACAG AAAAAAACCC TGTTTCAGAG CGTGCTGGAC
GGCTGGCGCA TCGGTAACGC CGGCCCCGAA CGCGGTAGCA AAAACACACT CGAGCTCAAG
GCGCGCATTA CCGCCAACGG CGAACGGCTG GTCATTACCG GTCAGAAGTT CTACTCCACA
GGTGCTTTGT TTGCCCACTG GGTAGCGGTC AAGGCGCTGG ACGATCAAGG CCGGCAAGTT
ATGGCCTTCG TCAAACGCGG CACGCCGGGC CTGAGCATCG TCGATGACTG GTCGGGCTTT
GGCCAGCGCA CCACGGCGAG CGGCACAGTG CTGCTCGACA ACGTGGCAGT GGATGCCGAG
CAGGTCGTCG ACAACTGGCG CCTGGCGCTG ACACCCAATA TTCAGGGCGC GGTCTCGCAA
CTGATTCAAG CGGCAATCGA TGCGGGCATT GCTCGCGGTG CTATCGATGA TGCGATTGCC
TTCGTCCGCG AAAAGTCCCG CCCGTGGATC GACGCCAAGG TCGAGCGCGC CAGCGACGAC
CTGTATGTGA TCGCCGACAT CGGCAAGCTG AAGCTCGAAC TGCATGCGGC TGAGGCCTTG
TTGCGCAAGG CGGGTCAGGA ACTGGATGAG ATCAACGCTG CGCCCATCGA CGAACAGTCG
GCGGCACGCG CTTCCATCGC CGTAGCACGC GCCAAGGTGC TGACCACCGA AATCTCCTTG
CTGGCCAGCG AAAAGCTGTT CGAGCTGGCA GGCAGCCGCG CAACGCTTGC CGAGTTCAAT
CTCGACCGCC ACTGGCGTAA CGCACGCGTT CACACCCTGC ACGACCCGGT GCGCTGGAAA
TACCACGCGG TCGGCACCTG GCATTTGAAC GGCACCCTGC CCGCTCGCCA TTCCTGGATC
TGA
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| Protein sequence | MVPFTTTPVD KPRAVPTASE RRESDPATVT AHHVTASQEP DVAPRLLPAT VLQNDAEAIA
AAHRLAASAR LNAATRDQQR ALPWAEIEHF TRSGLGSISI PRAYGGPQVS FATVAEVFRI
ISTADPALGQ IPQNQFGILN LLQSSATEQQ KKTLFQSVLD GWRIGNAGPE RGSKNTLELK
ARITANGERL VITGQKFYST GALFAHWVAV KALDDQGRQV MAFVKRGTPG LSIVDDWSGF
GQRTTASGTV LLDNVAVDAE QVVDNWRLAL TPNIQGAVSQ LIQAAIDAGI ARGAIDDAIA
FVREKSRPWI DAKVERASDD LYVIADIGKL KLELHAAEAL LRKAGQELDE INAAPIDEQS
AARASIAVAR AKVLTTEISL LASEKLFELA GSRATLAEFN LDRHWRNARV HTLHDPVRWK
YHAVGTWHLN GTLPARHSWI
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