Gene PSPTO_5183 details

Gene Information

• Locus tag: PSPTO_5183
• ID: 1186868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5898642
• End bp: 5899361
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637396502
• Product: hypothetical protein
• Protein accession: NP_794914
• Protein GI: 28872295

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.836807
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCATG TCACTTGCAA AGCAGCCCAT CAGGAGCTGC CAACGCCTTC CATACCGCAG 
GCCAGCCGTC ATGGCATAGG CGTGAGGATC GCCTCTCAAC TCACGGTTCA TGTCGAGCCG 
TACGCCAACA TGGACGAGGG CGATCTGATC GAGCTGTTCT GGGACGGCTG TTACGTCGCG 
TCAAAAATTC TAAAGGCTTC CGACATCGAC AAAACCATTG TCCTACGTGT ACCCGAAAGC 
TTTCTTCAGA ACGGCAAGGC ACGGACCTAC TACCGGGTCA TGAAAATAGG CGGAACACCC 
CTGACCTCGC CGTGCCGCAA GCTGTGGGTC AAGCTGAGCG CCCCCGGCGG CAATCTGATC 
AGTGCCCACA CTGAAGAAAA CCAGGGCCTG GCACCGCTCT ATGTCGCACC GTCGGTCATC 
CGTCGCGGAC TCTCGCGCAG GCATCTGGAA GGAGGTCTGC CGATGACCAT CGAGCCTTAT 
CTGAACATGG CCGTTCACGA CGAGATCACC GTGCGCTGGG GCGATCTGCG CATGGACCTG 
CCGCCCCTGA TCGCCGAGGA CGTCGGCGAA CCGATCGACC TGGTCATCCC CCCTGCGTTG 
ATCATCGAAG GCGGTGAAGA ACAGCGCCTG GAAGTGACTT ACTGCGTTAT CGACCGGGTC 
GGCAATAACT CCCTCTGGGC ACCCCCGCGG CTGATCAAGG CACTGCCGAT CGACGAGTGA 

 

Protein sequence

MSHVTCKAAH QELPTPSIPQ ASRHGIGVRI ASQLTVHVEP YANMDEGDLI ELFWDGCYVA 
SKILKASDID KTIVLRVPES FLQNGKARTY YRVMKIGGTP LTSPCRKLWV KLSAPGGNLI 
SAHTEENQGL APLYVAPSVI RRGLSRRHLE GGLPMTIEPY LNMAVHDEIT VRWGDLRMDL 
PPLIAEDVGE PIDLVIPPAL IIEGGEEQRL EVTYCVIDRV GNNSLWAPPR LIKALPIDE