Gene PSPTO_5175 details

Gene Information

• Locus tag: PSPTO_5175
• ID: 1186860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5891558
• End bp: 5892091
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637396494
• Product: hypothetical protein
• Protein accession: NP_794906
• Protein GI: 28872287

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCAA AACGTTTGCT CTGCCTTGCA GGTAGCACTT TGGCCTTCAC TTGCCTGTCG 
TCCGTGGCCC TGGCTCAGAC TGACCTGCCT GAAAGCGTCC ACGTGCCAGC TGGCAACAAA 
GTCAGCATGA CGACCACCGG GGTGGGCGAA ATCACCTACG AGTGCCGCGC CAAAGCCAAC 
ATGCCCAACG AGCTGGAATG GGCGTTCGTA GGCCCCAAAG CCGTACTCAA TGACAAAAGC 
GGCAAACAGG TCGGCACTTA CTACGGCCCG CCTGCCACCT GGGAAGCCAA AGACGGCTCC 
AAAGTGACCG GTACTCAGGT TGCTGTGGCT CCATCGAGCG CTGGCAACCT GCCGTATCAA 
CTGGTCAAGG CCAACCCGGC TGAAGGCAAA GGCGCAATGA CCGGCGTGAC CTACATTCAG 
CGCGTGGCGT TGAAAGGTGG CGTTGCACCG GCCAAAGCCT GCGCAGAGAG CAACAAGGGC 
GCCAAAGAAG TGGTCAAGTA TCAGGCTGAC TACCTGTTCT GGACCGCCAG CTGA 

 

Protein sequence

MNAKRLLCLA GSTLAFTCLS SVALAQTDLP ESVHVPAGNK VSMTTTGVGE ITYECRAKAN 
MPNELEWAFV GPKAVLNDKS GKQVGTYYGP PATWEAKDGS KVTGTQVAVA PSSAGNLPYQ 
LVKANPAEGK GAMTGVTYIQ RVALKGGVAP AKACAESNKG AKEVVKYQAD YLFWTAS