Gene PSPTO_5173 details

Gene Information

• Locus tag: PSPTO_5173
• ID: 1186858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5889631
• End bp: 5890251
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637396492
• Product: hypothetical protein
• Protein accession: NP_794904
• Protein GI: 28872285
• COG category: [S] Function unknown
• COG ID: [COG3758] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAGA CCCGCCTGCT GCGCGCCGCC GACTACCCAC GCATGCCATG GAAAAACGGC 
GGCGGCAGCA CCGAAGAAAT CGCACGCGAC GCAGGCCAGG ACCTCGACGG CTTTGGCTGG 
CGACTGTCGA TTGCCGACAT CGACACCTCA GGCGGCTTCT CGGTATTCGC CGGTTATCAA 
CGCATCATTA CCGTATTGCA GGGCGCCGGC ATGACCCTGG AGGTGGACGG CGTGGCCAGT 
CGCCCGCTGC TGCCTTCAGA TCCGTTTGCC TTCAGTGGTG ACAGCGCAGT CAGCTGCACC 
CTGCTGGACG GTCCGATTCG CGACTTCAAT CTGATCTATG CTGCACACCG TTACACAGCG 
CGCCTGCACT GGATCGACGT TCGTCATCCC CAGCGTCTGT TCAGTTCGGC CAGCACCTTC 
GTCCTGTTCA GCATGGCCGA ACAGGTGGCG ATCAGCGTCG ACGGCCAGCC TTGGGAAATT 
CTCGGCAAAC ACGACTGCGC GCTGGTGGAT AATCCCGGCG GTTTGCTGGA AATCGAACTG 
CAATCACCAC GCGTCAGCCG TTGCTGCCTC ATCGAGCTCA GTGCCACGGG CCAGTCACCG 
CTTTCTGGCA CCTCACAATA A 

 

Protein sequence

MTKTRLLRAA DYPRMPWKNG GGSTEEIARD AGQDLDGFGW RLSIADIDTS GGFSVFAGYQ 
RIITVLQGAG MTLEVDGVAS RPLLPSDPFA FSGDSAVSCT LLDGPIRDFN LIYAAHRYTA 
RLHWIDVRHP QRLFSSASTF VLFSMAEQVA ISVDGQPWEI LGKHDCALVD NPGGLLEIEL 
QSPRVSRCCL IELSATGQSP LSGTSQ