| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5166 |
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| Symbol | |
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| ID | 1186851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5880710 |
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| End bp | 5883529 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396485 |
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| Product | hypothetical protein |
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| Protein accession | NP_794897 |
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| Protein GI | 28872278 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.095267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTTGGA TTTGTCTGGT AGTGGGCGGT GCATTACTGG GCTATTTGCT CAGCTATGAC
GAGTGGACGG GGTTTCTGAT CGGCGCGCTG ATGGGCTGGG CTGTCTGGGC AGGCATTCGT
GTACGTGTGC TTGGCAGGCG ATCCGAGGCT CAACTGCAAC AGATACTCGC AACCGGCAAA
AACATCGAGA CCCTCCAGCA ACGCCTTGGC GCACTTGAAC GCCAGCCTGC ACCCGCCTTC
GTACCGCCTG CACAGGACGC CGCTCCGCTG CCGGTGGATG CTGTCATTCT GCAAGCGCCG
ACTGCCGGCC CCGAACTGAT CTGGGACCTG CCGGACGAAC CACAAACGCA ACCAACGCAA
CCTCCCGAAC CTGCCGCCGC ACTCCCCCAG CCATCACCAC CGGCAACACC CAACCTGCTG
GACCGCGCCA TCGAGCGCGC AAAGAACTGG CTGCTGGGCG GCAATACAGT GTTGCGCGTC
GGCGTGGTCG TGCTGTTTCT CGGCCTGGCG TTTCTGCTGC GTTATGCCAC CGAAGGCGTG
GTTGTGCCTG TTGAAGCACG CTACGCCGGT GTTGCAGCCA GTGCGCTGGC CTTGTTGGCG
CTGGGCTGGT GGCTAAGGTT GCGCAACGGG CCTTACGCGC TGATGCTGCA AGGCGCTGGC
GTCGGCGTGT TGTACCTGAC TGTATTCGCA GCGATGAAGC TGCACGCATT GCTGGACCCG
ACGCTGGGCT TTGCGCTGCT GGTCGCCGTC ACGGTGTTCT CGGCCATTCT GGCGCTGAAC
CAGAATTCGC TGGCGCTGGC CTGCGCGGGC GCACTCGGCG GGTTTGCGGC ACCGATTCTG
GCCTCGACCG GTCAAGGCAG CCACGTTTCG CTGTTCAGTT ATTTCGCCCT GCTCAATGCG
GGCATCATCG CCATCGCCTG GTTCAAGGCC TGGCGCGTCC TCAACCTGAT CGGCTTTTTC
GGCACCTTCG GCATCGGCTT CGCCTGGGGC ATCAGGGCTT ACACCCCCGA ACTGTTCTGG
AGCACCGAAC CCTTCCTGAT TCTGTTCTTC CTGATGTATC TGGCTATCGG TCTGCTGTTC
GCCCGCCAAA AGCTGCTGGA ACTCACTGAC GCGCCACCGG ATGCCAGTCG CGAAACCCTG
CTGCGCTGGC CTGCACGCCA AGGTGATTAC GTCGACGGCA CACTGCTGTT TGGCACGCCA
ATCGTCGGGT TCGGCCTGCA ATACGCACTG GTCGAACACC TTGAGTTCGG TGCCGCGTTC
AGCGCGCTCA CGCTGGGCCT GATCTACATG GGGGTGGCAC GCTGGCTGGC GGCACGTGCA
ACCGGCCGAA CCGTTTTGTT GATGGAAACC TGCCTGGCGC TGGGCGTGGT GTTTGCCACA
TTGGCAATAC CGCTGGGCCT TGGTTCGCAG TGGACGACCA GTGCCTGGGC CGTGGAAGGC
GCAGCGGTTT TCTGGCTGGG CCTGCGCCAG CACCGTAGGC TGGCACAGGT TTTCGGCCTG
GTGTTGCAAC TGGCCGCCAG CGCGATTCTG ATCAGCGGCG GCACCGACAG CGCGCGGCAA
GCCTTTGCCA ATGATTACTG GACGCCGATG ATCCTGGCCA TCGCCGCCAT GGTCAGCGCC
TGGTGCGTGT TCCGCCTCAA TTCGCTGACC CTCATCGACC AGCGCACCGC TCGAACACTG
CTGGTCATCT GGGGGGCGTT CTGGTGGCTG GTTTCGCTGG CCAGCGCGGC CGTCCTGCAC
GCGCCAGCGC CGTATCTGGC CTCCACGGCC CTAATCGCCA TGGCAATCAG CGTGGCGCTC
TGGGCCGCAT TCGCCCTCCG TTTGCGCTGG ACGGATCTCG CCGCGCTGTG CAGCGCACTA
ACGCCTGTGT GCGCTGCATT GCTGATGATC TCGGTGTACC TGCGCAATAA TCCGGCAGGC
AACCTGGGCT GGCTGGCCTG GCTGGCGGTG TTCGCGGTGC ATCTGCTAAG TCTGCGCTAC
CTGGCGGGCC TGCAATCCGT CCTTGCCCAA CGTATCGCTC ACACAGTGGG CTGCCTGCTG
ATCATAAGCG TGCTGGCACT GGAGTTGCGT TTCGGTCTGT TGCAATTGTC CGAGTATTAC
AACGCCTGGC GCTGGCTGGG TTGGGCTATC CTGCCGAGCC TGTTCCTGCT GGCGATGAGT
TCGACACGTC AATGGCCGTG GCCCGTGAAA GCCTGCCCCG AGGCTTATCA CGCAGGAGCT
GCCGCGCCAC TGGCGGCCCT GATGCTGGTG TGGTTCTGGC TGGCGAATAT CTTCAGCGAC
GGCGCCGCCG ATCCGCTGCC TTACCTACCG CTGTTCAACC CGCTGGAAAT CGGCCTGCTG
CTCGCGCTGA CCGGCGTGTG CCTGTGGATG CGCACCTACC TGACGCACAA ACGCAATCAC
ACCCTGCTGC TGGCCGGCGC TTCGCTGTTC GCACTGATCA CGGCGATGGT CATGCGCACC
GCCCATCACT GGGCCGATGT GCCGTGGGAA ACCGAGGCAC TGCTGGCGTC GATGCGCGTT
CAGGCGGGCT TGTCGATTGT CTGGACGCTG ATGGCGCTGG CGTTGATGAT CGGCGGCCAC
ATGCGCGCCA ATCGCGAAAT CTGGCTCGGC GGCGCAGCAT TGATCGGGGT GGTGGTGATC
AAACTGTTTT TTGTCGAGCT GAGCAATCGC GGCGGCATGG AGCGTATCGT CTCGTTCATC
GGTGTTGGCA TTTTGCTACT GGTGGTGGGA TATTTCGCAC CATTACCGCC GAAACATGCT
GTCAAAGATC TCGGCGAAAC ACCCGGCCCT GGCCCGACTG CAGCGCCTGA AACGCCATGA
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| Protein sequence | MLWICLVVGG ALLGYLLSYD EWTGFLIGAL MGWAVWAGIR VRVLGRRSEA QLQQILATGK
NIETLQQRLG ALERQPAPAF VPPAQDAAPL PVDAVILQAP TAGPELIWDL PDEPQTQPTQ
PPEPAAALPQ PSPPATPNLL DRAIERAKNW LLGGNTVLRV GVVVLFLGLA FLLRYATEGV
VVPVEARYAG VAASALALLA LGWWLRLRNG PYALMLQGAG VGVLYLTVFA AMKLHALLDP
TLGFALLVAV TVFSAILALN QNSLALACAG ALGGFAAPIL ASTGQGSHVS LFSYFALLNA
GIIAIAWFKA WRVLNLIGFF GTFGIGFAWG IRAYTPELFW STEPFLILFF LMYLAIGLLF
ARQKLLELTD APPDASRETL LRWPARQGDY VDGTLLFGTP IVGFGLQYAL VEHLEFGAAF
SALTLGLIYM GVARWLAARA TGRTVLLMET CLALGVVFAT LAIPLGLGSQ WTTSAWAVEG
AAVFWLGLRQ HRRLAQVFGL VLQLAASAIL ISGGTDSARQ AFANDYWTPM ILAIAAMVSA
WCVFRLNSLT LIDQRTARTL LVIWGAFWWL VSLASAAVLH APAPYLASTA LIAMAISVAL
WAAFALRLRW TDLAALCSAL TPVCAALLMI SVYLRNNPAG NLGWLAWLAV FAVHLLSLRY
LAGLQSVLAQ RIAHTVGCLL IISVLALELR FGLLQLSEYY NAWRWLGWAI LPSLFLLAMS
STRQWPWPVK ACPEAYHAGA AAPLAALMLV WFWLANIFSD GAADPLPYLP LFNPLEIGLL
LALTGVCLWM RTYLTHKRNH TLLLAGASLF ALITAMVMRT AHHWADVPWE TEALLASMRV
QAGLSIVWTL MALALMIGGH MRANREIWLG GAALIGVVVI KLFFVELSNR GGMERIVSFI
GVGILLLVVG YFAPLPPKHA VKDLGETPGP GPTAAPETP
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