| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5165 |
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| Symbol | glgP |
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| ID | 1186850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5878027 |
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| End bp | 5880477 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396484 |
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| Product | glycogen phosphorylase |
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| Protein accession | NP_794896 |
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| Protein GI | 28872277 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGG AACCACTTGT TCGTGACGCT GATGTGGCAG CTTTTCGCGC CGCCGTGCTC
GCCAAACTCA CCTATTCGGT GGGCAAGGAC CCCGACCATG CGTTTGAGCA TGACTGGTTT
GAAGCCGTTG CTCTGGCCGC TCGTGACCAC ATGGTCGAAC ACTGGATGGA CCACACGCGA
CAGATTTATC GCAAGGTCCA GAAGCGCGTT TATTACCTGT CGCTGGAATT TCTGATCGGC
AGGCTGCTGT ACGACAGCCT GAGCAACCTC GGCCTGCTGG AAGTCGCTCG CGAAGCGTTG
ACCGAGCTGG GCGTGGACAT CGAGCGTATC CGCTTGCTCG AACCCGACGC TGCGTTGGGT
AACGGCGGCC TGGGCCGCCT GGCCGCGTGC TTTATGGAAA GCATGTCGAC CCTGGGCATT
GCTGGCCACG GTTACGGCAT TCGTTACGAG CATGGGCTGT TTCGTCAGGG CATCGTCGAT
GGCTGGCAGC AGGAACAGAC CGAGAACTGG CTGGACTTCG GCAACCCGTG GGAATTCGAG
CGCCCTGAGG TCGTGTACTC CATCGGCTTC AGCGGCAGCG TCGACACCGT TGTTACCGAA
GCGGGCGAGT CGCGTCAGGT ATGGCGTCCG GGCGAAACCG TGCGGGCCAT CGCCTATGAC
ACCCCCGTGG TGGGCTGGCG CGGCAAAAGC GTCAACACCC TGCGCCTGTG GCGTGCCCGT
GCAGTAGAAG ATCTGCATCT GGAGCGCTTC AACGCCGGCG ACCACTTTGG TGCGGTGGCC
GAAGTGGTGC GCGCAGAAAG CATCTCGCGC GTGCTGTATC CGAACGATGC AACCGAAGCG
GGCCAGGAAC TGCGCCTGCG TCAAGAGTAC TTCTTCGTAT CGGCATCGCT GCAGGACTTG
CTGCGTCGCC ACCTGAACCA GCACGCGACG CTGACCGACC TGGCCGATCA CGCTGCGATC
CAGATGAACG ACACGCACCC CTCGATTGCA GTGGCCGAAC TGATGCGTCA GTTGATCGAC
AACCACAACA TTGCGTGGGA CACCGCCTGG AAAATCACCG TCGGCACCCT CGGTTACACC
AACCACACGT TGCTGCCCGA AGCGCTGGAA ACCTGGTCGG TCGGCCTGAT GGAGCGCATG
CTGCCGCGCC ACATGCAGAT CATCTACCTG ATCAACGCGC AACACATCGA CACGCTGCGT
GCCAAAGGCG TCGACGACGT CAACGTGCTG CGCGCGGTGT CGCTGATCGA AGAAGACAAC
GGTCGTCGTG TGCGCATGGG CAACCTCGCC TTCCTCGGTT CGCACAGCGT CAACGGCGTT
TCGGCGCTGC ATACTCAGTT GATGCGCAAG ACCGTATTCG CAGAGCTGCA CAAGATCTAC
CCGGACCGGA TCAACAACAA GACCAACGGC ATCACCTTCC GCCGCTGGCT GTTCCAGGCC
AACCCGAAAC TGACCGAAAT GCTCGTCGAA TCGCTGGGCG AGGATGTTCT GGACAACGCC
GAGACCCGAC TCAAGGAGCT TGAGCCGTTC GCCGAGAAGT CATCGTTTCG CAAGCAGATG
GCCGATCAGC GCCTGCACAG CAAGCGTGCC CTGGCCGCGA TCATTCATGA GCGTCTGGGC
ATTGCGGTCA ACCCTGCGGC GATGTTCGAC GTGCAGGTCA AACGGATTCA CGAATACAAG
CGTCAGTTGC TGAACCTGTT CCACACCGTC GCCCTGTATC AGGCCATTCG TGCCGAACCA
GGTACGGACT GGGTGCCGCG AGTGAAAATC TTCGCCGGCA AGGCAGCCGC CAGCTATCAC
TCGGCCAAGC TGATCATCAA GCTGACCAAC GACATCGCCC GGACCGTGAA CAACGACCCT
ACGGTTCGTG GTTTGCTGAA AGTGGTGTTC ATGCCCAACT ACAACGTCAG CCTGGCCGAG
AGCATCATTC CGGCAGCCGA CCTGTCCGAG CAGATCTCCA CTGCGGGCCT GGAAGCGTCG
GGCACCAGCA ACATGAAATT CGGCCTTAAC GGCGCACTGA CCATCGGCAC ACTGGACGGT
GCCAACGTGG AGATGAGCGA GCAGGTCGGG CTGGAGCACA TGTTCATCTT CGGCATGACC
TCGCAACAGG TCGAAGCCCG CAAACAGGCA GGCGAATTCA GCGCGCATGC TGATGTAGAG
GCATCGGGAC GTTTGAACGA TGTACTGCAA GCGATTCGTG GCGGGGTGTT CTCACCGGAT
GATCCGAACC GTTACGTGGG CCTGATCGAT CAGTTGCTGG CGTATGACCG TTTCCTTGTC
TGTGCCGACT TCGACTCGTA CTGGGCGGCC CAGGCCAAGG TCGAGGAACG CTGGCACGAC
TCCAAGGAAT GGTGGCGCTC GGCGGTGCTC AACACCGCAC GCATGGGCTG GTTCTCCTCG
GACCGGACCA TTCGCGAATA CGCCGGCGAC ATCTGGAAGG CGCTGGACTG A
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| Protein sequence | MSQEPLVRDA DVAAFRAAVL AKLTYSVGKD PDHAFEHDWF EAVALAARDH MVEHWMDHTR
QIYRKVQKRV YYLSLEFLIG RLLYDSLSNL GLLEVAREAL TELGVDIERI RLLEPDAALG
NGGLGRLAAC FMESMSTLGI AGHGYGIRYE HGLFRQGIVD GWQQEQTENW LDFGNPWEFE
RPEVVYSIGF SGSVDTVVTE AGESRQVWRP GETVRAIAYD TPVVGWRGKS VNTLRLWRAR
AVEDLHLERF NAGDHFGAVA EVVRAESISR VLYPNDATEA GQELRLRQEY FFVSASLQDL
LRRHLNQHAT LTDLADHAAI QMNDTHPSIA VAELMRQLID NHNIAWDTAW KITVGTLGYT
NHTLLPEALE TWSVGLMERM LPRHMQIIYL INAQHIDTLR AKGVDDVNVL RAVSLIEEDN
GRRVRMGNLA FLGSHSVNGV SALHTQLMRK TVFAELHKIY PDRINNKTNG ITFRRWLFQA
NPKLTEMLVE SLGEDVLDNA ETRLKELEPF AEKSSFRKQM ADQRLHSKRA LAAIIHERLG
IAVNPAAMFD VQVKRIHEYK RQLLNLFHTV ALYQAIRAEP GTDWVPRVKI FAGKAAASYH
SAKLIIKLTN DIARTVNNDP TVRGLLKVVF MPNYNVSLAE SIIPAADLSE QISTAGLEAS
GTSNMKFGLN GALTIGTLDG ANVEMSEQVG LEHMFIFGMT SQQVEARKQA GEFSAHADVE
ASGRLNDVLQ AIRGGVFSPD DPNRYVGLID QLLAYDRFLV CADFDSYWAA QAKVEERWHD
SKEWWRSAVL NTARMGWFSS DRTIREYAGD IWKALD
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