| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5164 |
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| Symbol | pip |
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| ID | 1186849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5876768 |
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| End bp | 5877739 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396483 |
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| Product | proline iminopeptidase |
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| Protein accession | NP_794895 |
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| Protein GI | 28872276 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGACTT TGTACCCGCA GATCAAACCC TACGCCCGGC ACGATCTGGC CGTGGAACAA
CCGCATGTGC TCTACGTCGA TGAAAGCGGT TCGCCTGAAG GTTTGCCTGT GGTGTTCATT
CACGGTGGCC CGGGTTCTGG ATGCGATGCG CACAGCCGCT GCTATTTCGA TCCCAACCTG
TACCGAATTG TTACCTTCGA TCAGCGTGGC TGTGGCCGCT CCACACCTCA TGCCAGCCTC
GAAAACAATA CCACCTGGAA GCTGGTGGAA GACCTTGAGG TCATTCGCGA GCACTTGGGC
ATCGACAAAT GGGTACTGTT CGGCGGCTCG TGGGGTTCGA CCCTCGCGCT GGCTTACGCT
CAGACCCACC CCGACCGCGT GCATGCGCTG ATTCTGCGTG GCGTGTTTCT GGCCCGTCAG
CAAGAAATCG ACTGGTTCTA TCAAGCGGGT GCCAGCCGCC TGTTCCCCGA TTACTGGCAG
GACTACGTCG CCCCTATCCC GTTGGATGAG CGCAACAATA TTCTCGCTGC CTTTCACAAG
CGTCTCACCG GCGCAGACCA GATTGCCCAG ATGCATGCCG CCAAGGCCTG GTCGACGTGG
GAAGGCCGCT GCGCAACCTT GCGTCCCAAT CCTCAGGTGG TCGACCGCTT TACCGATCCG
CACCGTGCCC TGTCCATCGC GCGTATCGAA TGCCACTACT TCATGAACAA GGCGTTTCTG
GAAGAGAACC AGCTGATTCG CGACATGCCG AAGATCGCTC ACCTGCCGGC AATCATTGTG
CACGGTCGTT ACGATGTCAT CTGCCCGCTG GACAATGCCT GGGAGCTGCA TCAGAACTGG
CCCGACAGCG AGCTGCAGAT CATTCGCGAC GCAGGGCATT CGGCCGCCGA AACCGGTATC
GCCGATGCGC TGGTACGTGC CGCTGCGCAG ATTGCGCAGA ACCTGCTCGA TCTGCCGCCC
GAAGAAGCCT GA
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| Protein sequence | MQTLYPQIKP YARHDLAVEQ PHVLYVDESG SPEGLPVVFI HGGPGSGCDA HSRCYFDPNL
YRIVTFDQRG CGRSTPHASL ENNTTWKLVE DLEVIREHLG IDKWVLFGGS WGSTLALAYA
QTHPDRVHAL ILRGVFLARQ QEIDWFYQAG ASRLFPDYWQ DYVAPIPLDE RNNILAAFHK
RLTGADQIAQ MHAAKAWSTW EGRCATLRPN PQVVDRFTDP HRALSIARIE CHYFMNKAFL
EENQLIRDMP KIAHLPAIIV HGRYDVICPL DNAWELHQNW PDSELQIIRD AGHSAAETGI
ADALVRAAAQ IAQNLLDLPP EEA
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